Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1585505 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1388238 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53033482 ~ 53033695 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1585501 | lncRNA | downstream | 1765 | 53031430 ~ 53031717 (-) | True | G1388234 |
| TU1585437 | lncRNA | downstream | 116991 | 52916182 ~ 52916491 (-) | True | G1388173 |
| TU1585436 | lncRNA | downstream | 118089 | 52915102 ~ 52915393 (-) | True | G1388172 |
| TU1585411 | lncRNA | downstream | 153608 | 52879244 ~ 52879874 (-) | True | G1388147 |
| TU1585401 | lncRNA | downstream | 182782 | 52850355 ~ 52850700 (-) | True | G1388137 |
| TU1585487 | lncRNA | upstream | 38876 | 53072571 ~ 53072804 (-) | True | G1388220 |
| TU1585516 | lncRNA | upstream | 39407 | 53073102 ~ 53073310 (-) | True | G1388249 |
| TU1585534 | lncRNA | upstream | 60850 | 53094545 ~ 53097524 (-) | True | G1388265 |
| TU1585606 | lncRNA | upstream | 184759 | 53218454 ~ 53218762 (-) | True | G1388328 |
| TU1585619 | lncRNA | upstream | 193461 | 53227156 ~ 53227471 (-) | True | G1388333 |
| XR_005036542.1 | mRNA | downstream | 35830 | 52965192 ~ 52997652 (-) | True | LOC110492270 |
| XM_021566449.2 | mRNA | downstream | 35839 | 52963457 ~ 52997643 (-) | False | LOC110492270 |
| XM_021566444.2 | mRNA | downstream | 71542 | 52950656 ~ 52961940 (-) | False | LOC110492269 |
| XM_021566452.2 | mRNA | upstream | 2402 | 53036097 ~ 53043465 (-) | False | LOC110492271 |
| XM_021566451.2 | mRNA | upstream | 2402 | 53036097 ~ 53043467 (-) | False | LOC110492271 |
| XR_005036543.1 | mRNA | upstream | 2402 | 53036097 ~ 53043467 (-) | False | LOC110492271 |
| XR_005036544.1 | mRNA | upstream | 3833 | 53037528 ~ 53043475 (-) | True | LOC110492271 |
| XM_021566454.2 | mRNA | upstream | 64186 | 53097881 ~ 53146173 (-) | False | LOC110492274 |
| TU1585503 | other | downstream | 561 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 461175 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585179 | other | downstream | 604723 | 52418876 ~ 52428759 (-) | True | spen |
| TU1583828 | other | downstream | 1043487 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1582822 | other | downstream | 1904834 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1585952 | other | upstream | 696642 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1587231 | other | upstream | 1511033 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1587517 | other | upstream | 1951123 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1588497 | other | upstream | 2790464 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 3030808 | 56064503 ~ 56064862 (-) | True | G1391586 |
