Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1585487 |
| length | 234 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1388220 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53072571 ~ 53072804 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1585505 | lncRNA | downstream | 38876 | 53033482 ~ 53033695 (-) | True | G1388238 |
| TU1585501 | lncRNA | downstream | 40854 | 53031430 ~ 53031717 (-) | True | G1388234 |
| TU1585437 | lncRNA | downstream | 156080 | 52916182 ~ 52916491 (-) | True | G1388173 |
| TU1585436 | lncRNA | downstream | 157178 | 52915102 ~ 52915393 (-) | True | G1388172 |
| TU1585411 | lncRNA | downstream | 192697 | 52879244 ~ 52879874 (-) | True | G1388147 |
| TU1585516 | lncRNA | upstream | 298 | 53073102 ~ 53073310 (-) | True | G1388249 |
| TU1585534 | lncRNA | upstream | 21741 | 53094545 ~ 53097524 (-) | True | G1388265 |
| TU1585606 | lncRNA | upstream | 145650 | 53218454 ~ 53218762 (-) | True | G1388328 |
| TU1585619 | lncRNA | upstream | 154352 | 53227156 ~ 53227471 (-) | True | G1388333 |
| TU1585641 | lncRNA | upstream | 181925 | 53254729 ~ 53254985 (-) | True | G1388351 |
| XR_005036544.1 | mRNA | downstream | 29096 | 53037528 ~ 53043475 (-) | True | LOC110492271 |
| XM_021566451.2 | mRNA | downstream | 29104 | 53036097 ~ 53043467 (-) | False | LOC110492271 |
| XR_005036543.1 | mRNA | downstream | 29104 | 53036097 ~ 53043467 (-) | False | LOC110492271 |
| XM_021566452.2 | mRNA | downstream | 29106 | 53036097 ~ 53043465 (-) | False | LOC110492271 |
| XR_005036542.1 | mRNA | downstream | 74919 | 52965192 ~ 52997652 (-) | True | LOC110492270 |
| XM_021566454.2 | mRNA | upstream | 25077 | 53097881 ~ 53146173 (-) | False | LOC110492274 |
| XM_021566456.2 | mRNA | upstream | 25078 | 53097882 ~ 53146173 (-) | True | LOC110492274 |
| XM_021564411.2 | mRNA | upstream | 92700 | 53165504 ~ 53176086 (-) | False | foxp3-2 |
| NM_001246332.1 | mRNA | upstream | 94081 | 53166885 ~ 53180903 (-) | False | foxp3-2 |
| XM_021564410.2 | mRNA | upstream | 94084 | 53166888 ~ 53181656 (-) | True | foxp3-2 |
| TU1585503 | other | downstream | 39650 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 500264 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585179 | other | downstream | 643812 | 52418876 ~ 52428759 (-) | True | spen |
| TU1583828 | other | downstream | 1082576 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1582837 | other | downstream | 1957506 | 51113403 ~ 51115065 (-) | True | dffb |
| TU1585952 | other | upstream | 657533 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1587231 | other | upstream | 1471924 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1587517 | other | upstream | 1912014 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1588497 | other | upstream | 2751355 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 2991699 | 56064503 ~ 56064862 (-) | True | G1391586 |
