Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1586973 |
| length | 279 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G1389537 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54144807 ~ 54145085 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1586969 | lncRNA | downstream | 3180 | 54141216 ~ 54141627 (-) | True | G1389533 |
| TU1586907 | lncRNA | downstream | 4729 | 54116463 ~ 54140078 (-) | True | G1389474 |
| TU1586904 | lncRNA | downstream | 29996 | 54112674 ~ 54114811 (-) | False | G1389472 |
| TU1586905 | lncRNA | downstream | 29996 | 54113925 ~ 54114811 (-) | True | G1389472 |
| TU1586948 | lncRNA | downstream | 48860 | 54095680 ~ 54095947 (-) | True | G1389512 |
| TU1586984 | lncRNA | upstream | 18473 | 54163558 ~ 54168597 (-) | False | LOC110491105 |
| TU1586985 | lncRNA | upstream | 20375 | 54165460 ~ 54168972 (-) | True | LOC110491105 |
| TU1587025 | lncRNA | upstream | 86401 | 54231486 ~ 54232349 (-) | True | G1389582 |
| TU1587047 | lncRNA | upstream | 118519 | 54263604 ~ 54264208 (-) | True | G1389598 |
| TU1587056 | lncRNA | upstream | 135460 | 54280545 ~ 54293497 (-) | True | LOC110492306 |
| XM_036945764.1 | mRNA | downstream | 176672 | 53958415 ~ 53968135 (-) | True | commd7 |
| XM_021564407.2 | mRNA | downstream | 176681 | 53956911 ~ 53968126 (-) | False | commd7 |
| NM_001165191.2 | mRNA | downstream | 176712 | 53957921 ~ 53968095 (-) | False | commd7 |
| XM_036947269.1 | mRNA | downstream | 225460 | 53776878 ~ 53919347 (-) | False | LOC110491103 |
| XM_036947268.1 | mRNA | downstream | 225464 | 53776878 ~ 53919343 (-) | False | LOC110491103 |
| XM_036947294.1 | mRNA | upstream | 22295 | 54167380 ~ 54236936 (-) | False | LOC110491105 |
| XM_036947295.1 | mRNA | upstream | 22295 | 54167380 ~ 54236936 (-) | False | LOC110491105 |
| XM_036947296.1 | mRNA | upstream | 22295 | 54167380 ~ 54236936 (-) | False | LOC110491105 |
| XM_036947297.1 | mRNA | upstream | 22295 | 54167380 ~ 54236936 (-) | False | LOC110491105 |
| XM_036947298.1 | mRNA | upstream | 22295 | 54167380 ~ 54236936 (-) | False | LOC110491105 |
| TU1585952 | other | downstream | 411892 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 1111886 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 1572500 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585179 | other | downstream | 1716048 | 52418876 ~ 52428759 (-) | True | spen |
| TU1583828 | other | downstream | 2154812 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1587231 | other | upstream | 399643 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1587517 | other | upstream | 839733 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1588497 | other | upstream | 1679074 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 1919418 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 2080329 | 56225414 ~ 56226061 (-) | True | G1391624 |
