Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1587479 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1389999 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54915302 ~ 54915518 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1587440 | lncRNA | downstream | 658 | 54910015 ~ 54914644 (-) | True | G1389961 |
| TU1587465 | lncRNA | downstream | 26204 | 54888815 ~ 54889098 (-) | True | G1389986 |
| TU1587464 | lncRNA | downstream | 27336 | 54887655 ~ 54887966 (-) | True | G1389985 |
| TU1587414 | lncRNA | downstream | 93435 | 54813332 ~ 54821867 (-) | True | G1389935 |
| TU1587350 | lncRNA | downstream | 158182 | 54736013 ~ 54757120 (-) | True | G1389871 |
| TU1587484 | lncRNA | upstream | 6952 | 54922470 ~ 54922918 (-) | True | G1390004 |
| TU1587446 | lncRNA | upstream | 22166 | 54937684 ~ 54939641 (-) | True | G1389967 |
| TU1587439 | lncRNA | upstream | 27389 | 54942907 ~ 54943850 (-) | True | G1389960 |
| TU1587494 | lncRNA | upstream | 30960 | 54946478 ~ 54956113 (-) | True | si:dkey-20d21.12 |
| TU1587444 | lncRNA | upstream | 50923 | 54966441 ~ 54967063 (-) | True | G1389965 |
| LOC110491107 | mRNA | downstream | 274588 | 54639471 ~ 54640714 (-) | True | LOC110491107 |
| XM_036945787.1 | mRNA | downstream | 279426 | 54635385 ~ 54635876 (-) | True | LOC118936330 |
| XM_021566517.2 | mRNA | downstream | 459286 | 54280345 ~ 54456016 (-) | False | LOC110492306 |
| XM_036947298.1 | mRNA | downstream | 678366 | 54167380 ~ 54236936 (-) | False | LOC110491105 |
| XM_036947320.1 | mRNA | upstream | 40344 | 54955862 ~ 54957989 (-) | False | si:dkey-20d21.12 |
| XM_036947321.1 | mRNA | upstream | 40344 | 54955862 ~ 54957989 (-) | False | si:dkey-20d21.12 |
| XM_036947324.1 | mRNA | upstream | 251245 | 55166763 ~ 55209300 (-) | False | sema3b |
| XM_036947323.1 | mRNA | upstream | 251245 | 55166763 ~ 55255351 (-) | False | sema3b |
| XM_036947325.1 | mRNA | upstream | 251245 | 55166763 ~ 55255352 (-) | False | sema3b |
| TU1587231 | other | downstream | 370059 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1585952 | other | downstream | 1182387 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 1882381 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 2342995 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585179 | other | downstream | 2486543 | 52418876 ~ 52428759 (-) | True | spen |
| TU1587517 | other | upstream | 69300 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1588497 | other | upstream | 908641 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 1148985 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 1309896 | 56225414 ~ 56226061 (-) | True | G1391624 |
| TU1589358 | other | upstream | 1365534 | 56281052 ~ 56293472 (-) | True | LOC110492371 |
