Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1587779 |
| length | 346 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1390253 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55162523 ~ 55162868 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1587778 | lncRNA | downstream | 1873 | 55160368 ~ 55160650 (-) | True | G1390252 |
| TU1587746 | lncRNA | downstream | 19281 | 55142909 ~ 55143242 (-) | True | G1390242 |
| TU1587745 | lncRNA | downstream | 20034 | 55142208 ~ 55142489 (-) | True | G1390241 |
| TU1587744 | lncRNA | downstream | 22100 | 55140080 ~ 55140423 (-) | True | G1390240 |
| TU1587702 | lncRNA | downstream | 89809 | 55072364 ~ 55072714 (-) | True | G1390199 |
| TU1587781 | lncRNA | upstream | 3911 | 55166779 ~ 55168038 (-) | True | sema3b |
| TU1587833 | lncRNA | upstream | 107323 | 55270191 ~ 55270431 (-) | True | G1390301 |
| TU1587835 | lncRNA | upstream | 112713 | 55275581 ~ 55275802 (-) | True | G1390303 |
| TU1587844 | lncRNA | upstream | 125843 | 55288711 ~ 55288981 (-) | True | G1390312 |
| TU1587880 | lncRNA | upstream | 153732 | 55316600 ~ 55316859 (-) | True | G1390346 |
| XM_036947320.1 | mRNA | downstream | 204534 | 54955862 ~ 54957989 (-) | False | si:dkey-20d21.12 |
| XM_036947321.1 | mRNA | downstream | 204534 | 54955862 ~ 54957989 (-) | False | si:dkey-20d21.12 |
| LOC110491107 | mRNA | downstream | 521809 | 54639471 ~ 54640714 (-) | True | LOC110491107 |
| XM_036945787.1 | mRNA | downstream | 526647 | 54635385 ~ 54635876 (-) | True | LOC118936330 |
| XM_021566517.2 | mRNA | downstream | 706507 | 54280345 ~ 54456016 (-) | False | LOC110492306 |
| XM_036947324.1 | mRNA | upstream | 3895 | 55166763 ~ 55209300 (-) | False | sema3b |
| XM_036947323.1 | mRNA | upstream | 3895 | 55166763 ~ 55255351 (-) | False | sema3b |
| XM_036947325.1 | mRNA | upstream | 3895 | 55166763 ~ 55255352 (-) | False | sema3b |
| XM_021566550.2 | mRNA | upstream | 187276 | 55350144 ~ 55372295 (-) | True | actr8 |
| XM_021566552.2 | mRNA | upstream | 212867 | 55375735 ~ 55383019 (-) | False | LOC110492331 |
| TU1587517 | other | downstream | 176260 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1587231 | other | downstream | 617280 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1585952 | other | downstream | 1429608 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 2129602 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 2590216 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1588497 | other | upstream | 661291 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 901635 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 1062546 | 56225414 ~ 56226061 (-) | True | G1391624 |
| TU1589358 | other | upstream | 1118184 | 56281052 ~ 56293472 (-) | True | LOC110492371 |
| TU1589476 | other | upstream | 1261404 | 56424272 ~ 56437279 (-) | False | G1391796 |
