Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1587844 |
| length | 271 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1390312 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55288711 ~ 55288981 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1587835 | lncRNA | downstream | 12909 | 55275581 ~ 55275802 (-) | True | G1390303 |
| TU1587833 | lncRNA | downstream | 18280 | 55270191 ~ 55270431 (-) | True | G1390301 |
| TU1587781 | lncRNA | downstream | 120673 | 55166779 ~ 55168038 (-) | True | sema3b |
| TU1587779 | lncRNA | downstream | 125843 | 55162523 ~ 55162868 (-) | True | G1390253 |
| TU1587778 | lncRNA | downstream | 128061 | 55160368 ~ 55160650 (-) | True | G1390252 |
| TU1587880 | lncRNA | upstream | 27619 | 55316600 ~ 55316859 (-) | True | G1390346 |
| TU1587884 | lncRNA | upstream | 28686 | 55317667 ~ 55317975 (-) | True | G1390350 |
| TU1587907 | lncRNA | upstream | 56814 | 55345795 ~ 55346061 (-) | True | G1390371 |
| TU1588222 | lncRNA | upstream | 103709 | 55392690 ~ 55395110 (-) | False | G1390645 |
| TU1588223 | lncRNA | upstream | 103709 | 55392690 ~ 55429824 (-) | True | G1390645 |
| XM_036947325.1 | mRNA | downstream | 33359 | 55166763 ~ 55255352 (-) | False | sema3b |
| XM_036947323.1 | mRNA | downstream | 33360 | 55166763 ~ 55255351 (-) | False | sema3b |
| XM_036947324.1 | mRNA | downstream | 79411 | 55166763 ~ 55209300 (-) | False | sema3b |
| XM_036947320.1 | mRNA | downstream | 330722 | 54955862 ~ 54957989 (-) | False | si:dkey-20d21.12 |
| XM_021566550.2 | mRNA | upstream | 61163 | 55350144 ~ 55372295 (-) | True | actr8 |
| XM_021566552.2 | mRNA | upstream | 86754 | 55375735 ~ 55383019 (-) | False | LOC110492331 |
| XM_021566555.2 | mRNA | upstream | 86754 | 55375735 ~ 55383019 (-) | False | LOC110492331 |
| XM_036947326.1 | mRNA | upstream | 86754 | 55375735 ~ 55383019 (-) | False | LOC110492331 |
| XM_036947327.1 | mRNA | upstream | 86754 | 55375735 ~ 55383021 (-) | True | LOC110492331 |
| TU1587517 | other | downstream | 302448 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1587231 | other | downstream | 743468 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1585952 | other | downstream | 1555796 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 2255790 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 2716404 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1588497 | other | upstream | 535178 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 775522 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 936433 | 56225414 ~ 56226061 (-) | True | G1391624 |
| TU1589358 | other | upstream | 992071 | 56281052 ~ 56293472 (-) | True | LOC110492371 |
| TU1589476 | other | upstream | 1135291 | 56424272 ~ 56437279 (-) | False | G1391796 |
