Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1588463 |
| length | 930 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G1390873 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55776153 ~ 55777082 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1588453 | lncRNA | downstream | 28664 | 55747048 ~ 55747489 (-) | True | G1390863 |
| TU1588452 | lncRNA | downstream | 29638 | 55746277 ~ 55746515 (-) | True | G1390862 |
| TU1588377 | lncRNA | downstream | 30887 | 55742140 ~ 55745266 (-) | False | LOC110492344 |
| TU1588376 | lncRNA | downstream | 30887 | 55742289 ~ 55745266 (-) | True | LOC110492344 |
| TU1588446 | lncRNA | downstream | 42780 | 55733173 ~ 55733373 (-) | True | G1390856 |
| TU1588467 | lncRNA | upstream | 4164 | 55781246 ~ 55781400 (-) | True | G1390877 |
| TU1588466 | lncRNA | upstream | 4447 | 55781529 ~ 55781881 (-) | True | G1390876 |
| TU1588480 | lncRNA | upstream | 21135 | 55798217 ~ 55804675 (-) | True | G1390888 |
| TU1588491 | lncRNA | upstream | 34563 | 55811645 ~ 55813087 (-) | True | G1390893 |
| TU1588498 | lncRNA | upstream | 67599 | 55844681 ~ 55847435 (-) | True | LOC110492353 |
| XM_021566584.2 | mRNA | downstream | 7124 | 55755130 ~ 55769029 (-) | True | LOC110492346 |
| XM_021566582.2 | mRNA | downstream | 30670 | 55742268 ~ 55745483 (-) | False | LOC110492344 |
| NM_001129988.2 | mRNA | downstream | 83341 | 55672785 ~ 55692812 (-) | True | LOC100170209 |
| XM_021564388.2 | mRNA | downstream | 96535 | 55671464 ~ 55679618 (-) | False | LOC100170209 |
| XM_021566578.2 | mRNA | downstream | 126738 | 55646145 ~ 55649415 (-) | True | LOC110492342 |
| XM_021566585.2 | mRNA | upstream | 6726 | 55783808 ~ 55787739 (-) | True | LOC110492348 |
| XM_021566592.2 | mRNA | upstream | 47073 | 55824155 ~ 55826646 (-) | False | LOC110492352 |
| XM_021566593.2 | mRNA | upstream | 67603 | 55844685 ~ 55847496 (-) | False | LOC110492353 |
| XM_036947334.1 | mRNA | upstream | 108301 | 55885383 ~ 55888359 (-) | True | LOC110492354 |
| XM_036947337.1 | mRNA | upstream | 119104 | 55896186 ~ 55908027 (-) | False | LOC110492355 |
| TU1587517 | other | downstream | 789890 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1587231 | other | downstream | 1230910 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1585952 | other | downstream | 2043238 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 2743232 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 3203846 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1588497 | other | upstream | 47077 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 287421 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 448332 | 56225414 ~ 56226061 (-) | True | G1391624 |
| TU1589358 | other | upstream | 503970 | 56281052 ~ 56293472 (-) | True | LOC110492371 |
| TU1589476 | other | upstream | 647190 | 56424272 ~ 56437279 (-) | False | G1391796 |
