Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1594791 |
| length | 268 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1396535 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 60669953 ~ 60670220 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1594789 | lncRNA | downstream | 1809 | 60667867 ~ 60668144 (-) | True | G1396533 |
| TU1594787 | lncRNA | downstream | 2765 | 60661556 ~ 60667188 (-) | True | LOC118939463 |
| TU1594778 | lncRNA | downstream | 44010 | 60625715 ~ 60625943 (-) | True | G1396527 |
| TU1594777 | lncRNA | downstream | 44506 | 60625114 ~ 60625447 (-) | True | G1396526 |
| TU1594776 | lncRNA | downstream | 45926 | 60623558 ~ 60624027 (-) | True | G1396525 |
| TU1594796 | lncRNA | upstream | 10229 | 60680449 ~ 60683407 (-) | False | LOC110492474 |
| TU1594795 | lncRNA | upstream | 11871 | 60682091 ~ 60683435 (-) | False | LOC110492474 |
| TU1594799 | lncRNA | upstream | 11871 | 60682091 ~ 60683407 (-) | False | LOC110492474 |
| TU1594793 | lncRNA | upstream | 11947 | 60682167 ~ 60683435 (-) | False | LOC110492474 |
| TU1594794 | lncRNA | upstream | 11947 | 60682167 ~ 60683407 (-) | False | LOC110492474 |
| NM_001124469.1 | mRNA | downstream | 12609 | 60653628 ~ 60657344 (-) | True | LOC100136193 |
| XM_021566818.2 | mRNA | downstream | 17149 | 60645712 ~ 60652804 (-) | False | pabpc1l |
| XM_021566819.2 | mRNA | downstream | 17149 | 60645712 ~ 60652804 (-) | True | pabpc1l |
| XM_021566809.2 | mRNA | downstream | 214744 | 60431333 ~ 60455209 (-) | True | LOC110492466 |
| XM_021566810.2 | mRNA | downstream | 215226 | 60431333 ~ 60454727 (-) | False | LOC110492466 |
| XM_021566823.2 | mRNA | upstream | 11942 | 60682162 ~ 60683456 (-) | False | LOC110492474 |
| XR_005036569.1 | mRNA | upstream | 20048 | 60690268 ~ 60743760 (-) | False | LOC110492475 |
| XR_005036568.1 | mRNA | upstream | 20048 | 60690268 ~ 60743762 (-) | False | LOC110492475 |
| XM_036947486.1 | mRNA | upstream | 39806 | 60710026 ~ 60725238 (-) | False | LOC110492475 |
| XM_036947485.1 | mRNA | upstream | 39806 | 60710026 ~ 60740710 (-) | False | LOC110492475 |
| TU1594786 | other | downstream | 6437 | 60661556 ~ 60663516 (-) | False | LOC118939463 |
| TU1594716 | other | downstream | 87918 | 60554756 ~ 60582035 (-) | False | G1396467 |
| TU1594714 | other | downstream | 87918 | 60557038 ~ 60582035 (-) | True | G1396467 |
| TU1593009 | other | downstream | 1313104 | 59354200 ~ 59356849 (-) | True | G1394978 |
| TU1592757 | other | downstream | 1557056 | 59111372 ~ 59112897 (-) | True | G1394768 |
| TU1594806 | other | upstream | 23389 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1594840 | other | upstream | 82885 | 60753105 ~ 60754871 (-) | True | abhd6b |
| TU1597246 | other | upstream | 2064523 | 62734743 ~ 62735569 (-) | True | G1398619 |
| TU1597892 | other | upstream | 2528899 | 63199119 ~ 63292201 (-) | True | G1399235 |
| TU1598025 | other | upstream | 2714629 | 63384849 ~ 63385262 (-) | True | G1399367 |
