Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1596537 |
| length | 345 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1398033 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 61606009 ~ 61606353 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1596534 | lncRNA | downstream | 1847 | 61603946 ~ 61604162 (-) | True | G1398030 |
| TU1596492 | lncRNA | downstream | 98146 | 61492168 ~ 61507863 (-) | True | G1397992 |
| TU1596447 | lncRNA | downstream | 185409 | 61420186 ~ 61420600 (-) | True | G1397951 |
| TU1596310 | lncRNA | downstream | 446348 | 61158624 ~ 61159661 (-) | True | G1397819 |
| TU1596319 | lncRNA | downstream | 449217 | 61156535 ~ 61156792 (-) | True | G1397828 |
| TU1596539 | lncRNA | upstream | 5818 | 61612171 ~ 61612404 (-) | True | G1398035 |
| TU1596540 | lncRNA | upstream | 7885 | 61614238 ~ 61614440 (-) | True | G1398036 |
| TU1596545 | lncRNA | upstream | 13480 | 61619833 ~ 61620260 (-) | True | G1398041 |
| TU1596546 | lncRNA | upstream | 14661 | 61621014 ~ 61621808 (-) | True | G1398042 |
| TU1596547 | lncRNA | upstream | 15937 | 61622290 ~ 61622855 (-) | True | G1398043 |
| XM_021566895.2 | mRNA | downstream | 4586 | 61595093 ~ 61601423 (-) | True | LOC110492509 |
| XM_021566896.2 | mRNA | downstream | 9297 | 61595093 ~ 61596712 (-) | False | LOC110492509 |
| XM_036947505.1 | mRNA | downstream | 11188 | 61558700 ~ 61594821 (-) | True | dnah12 |
| XM_021566871.2 | mRNA | downstream | 47587 | 61552330 ~ 61558422 (-) | True | asb14b |
| XM_021566872.2 | mRNA | downstream | 47673 | 61552330 ~ 61558336 (-) | False | asb14b |
| XM_021566892.2 | mRNA | upstream | 80894 | 61687247 ~ 61689079 (-) | True | LOC110492507 |
| XM_021566869.2 | mRNA | upstream | 172765 | 61779118 ~ 61796706 (-) | False | LOC110492496 |
| XM_021566866.2 | mRNA | upstream | 172765 | 61779118 ~ 61796707 (-) | False | LOC110492496 |
| XM_021566868.2 | mRNA | upstream | 172765 | 61779118 ~ 61796715 (-) | True | LOC110492496 |
| XM_021566897.2 | mRNA | upstream | 208191 | 61814544 ~ 61941054 (-) | False | LOC110492510 |
| TU1594840 | other | downstream | 851138 | 60753105 ~ 60754871 (-) | True | abhd6b |
| TU1594806 | other | downstream | 911973 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1594786 | other | downstream | 942493 | 60661556 ~ 60663516 (-) | False | LOC118939463 |
| TU1594716 | other | downstream | 1023974 | 60554756 ~ 60582035 (-) | False | G1396467 |
| TU1597246 | other | upstream | 1128390 | 62734743 ~ 62735569 (-) | True | G1398619 |
| TU1597892 | other | upstream | 1592766 | 63199119 ~ 63292201 (-) | True | G1399235 |
| TU1598025 | other | upstream | 1778496 | 63384849 ~ 63385262 (-) | True | G1399367 |
| TU1599309 | other | upstream | 2497017 | 64103370 ~ 64105039 (-) | True | G1400503 |
| TU1599365 | other | upstream | 2650573 | 64256926 ~ 64257433 (-) | True | G1400552 |
