Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1598078 |
| length | 263 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1399410 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 63447059 ~ 63447321 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1598076 | lncRNA | downstream | 238 | 63444848 ~ 63446821 (-) | True | G1399408 |
| TU1598063 | lncRNA | downstream | 9575 | 63437193 ~ 63437484 (-) | True | G1399404 |
| TU1598061 | lncRNA | downstream | 12460 | 63434355 ~ 63434599 (-) | True | G1399402 |
| TU1598057 | lncRNA | downstream | 24213 | 63420350 ~ 63422846 (-) | True | G1399398 |
| TU1598039 | lncRNA | downstream | 49728 | 63397103 ~ 63397331 (-) | True | G1399381 |
| TU1598081 | lncRNA | upstream | 5600 | 63452921 ~ 63453274 (-) | True | G1399413 |
| TU1598137 | lncRNA | upstream | 47076 | 63494397 ~ 63496629 (-) | True | G1399468 |
| TU1598239 | lncRNA | upstream | 114142 | 63561463 ~ 63561745 (-) | True | G1399561 |
| TU1598241 | lncRNA | upstream | 117120 | 63564441 ~ 63564720 (-) | True | G1399563 |
| TU1598242 | lncRNA | upstream | 124477 | 63571798 ~ 63572064 (-) | True | G1399564 |
| XM_021566908.2 | mRNA | downstream | 17532 | 63424911 ~ 63429527 (-) | True | LOC110492520 |
| XM_021566909.2 | mRNA | downstream | 17580 | 63424911 ~ 63429479 (-) | False | LOC110492520 |
| XM_036947533.1 | mRNA | downstream | 438560 | 62959965 ~ 63008499 (-) | True | b4galt5 |
| XM_036947534.1 | mRNA | downstream | 456080 | 62959965 ~ 62990979 (-) | False | b4galt5 |
| XM_036947529.1 | mRNA | downstream | 781553 | 62469950 ~ 62665506 (-) | True | LOC118939569 |
| XM_036947536.1 | mRNA | upstream | 616929 | 64064250 ~ 64081609 (-) | True | LOC110492523 |
| LOC118939600 | mRNA | upstream | 618865 | 64066186 ~ 64066289 (-) | True | LOC118939600 |
| XM_021566915.2 | mRNA | upstream | 640863 | 64088184 ~ 64092123 (-) | True | rab5if |
| XM_036947537.1 | mRNA | upstream | 660674 | 64107995 ~ 64145663 (-) | False | plcg1 |
| XM_036947538.1 | mRNA | upstream | 660674 | 64107995 ~ 64145664 (-) | False | plcg1 |
| TU1598025 | other | downstream | 61797 | 63384849 ~ 63385262 (-) | True | G1399367 |
| TU1597892 | other | downstream | 154858 | 63199119 ~ 63292201 (-) | True | G1399235 |
| TU1597246 | other | downstream | 711490 | 62734743 ~ 62735569 (-) | True | G1398619 |
| TU1594840 | other | downstream | 2692188 | 60753105 ~ 60754871 (-) | True | abhd6b |
| TU1594806 | other | downstream | 2753023 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1599309 | other | upstream | 656049 | 64103370 ~ 64105039 (-) | True | G1400503 |
| TU1599365 | other | upstream | 809605 | 64256926 ~ 64257433 (-) | True | G1400552 |
| TU1599377 | other | upstream | 836886 | 64284207 ~ 64284547 (-) | True | G1400564 |
| TU1599378 | other | upstream | 838307 | 64285628 ~ 64285993 (-) | True | G1400565 |
| TU1599394 | other | upstream | 862562 | 64309883 ~ 64310456 (-) | True | G1400578 |
