Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1598246 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1399568 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 63576647 ~ 63576860 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1598244 | lncRNA | downstream | 2318 | 63574097 ~ 63574329 (-) | True | G1399566 |
| TU1598242 | lncRNA | downstream | 4583 | 63571798 ~ 63572064 (-) | True | G1399564 |
| TU1598241 | lncRNA | downstream | 11927 | 63564441 ~ 63564720 (-) | True | G1399563 |
| TU1598239 | lncRNA | downstream | 14902 | 63561463 ~ 63561745 (-) | True | G1399561 |
| TU1598137 | lncRNA | downstream | 80018 | 63494397 ~ 63496629 (-) | True | G1399468 |
| TU1598247 | lncRNA | upstream | 1625 | 63578485 ~ 63578750 (-) | True | G1399569 |
| TU1598248 | lncRNA | upstream | 3691 | 63580551 ~ 63580816 (-) | True | G1399570 |
| TU1598249 | lncRNA | upstream | 6312 | 63583172 ~ 63583382 (-) | True | G1399571 |
| TU1598250 | lncRNA | upstream | 7151 | 63584011 ~ 63584251 (-) | True | G1399572 |
| TU1598257 | lncRNA | upstream | 15320 | 63592180 ~ 63592384 (-) | True | G1399579 |
| XM_021566908.2 | mRNA | downstream | 147120 | 63424911 ~ 63429527 (-) | True | LOC110492520 |
| XM_021566909.2 | mRNA | downstream | 147168 | 63424911 ~ 63429479 (-) | False | LOC110492520 |
| XM_036947533.1 | mRNA | downstream | 568148 | 62959965 ~ 63008499 (-) | True | b4galt5 |
| XM_036947534.1 | mRNA | downstream | 585668 | 62959965 ~ 62990979 (-) | False | b4galt5 |
| XM_036947529.1 | mRNA | downstream | 911141 | 62469950 ~ 62665506 (-) | True | LOC118939569 |
| XM_036947536.1 | mRNA | upstream | 487390 | 64064250 ~ 64081609 (-) | True | LOC110492523 |
| LOC118939600 | mRNA | upstream | 489326 | 64066186 ~ 64066289 (-) | True | LOC118939600 |
| XM_021566915.2 | mRNA | upstream | 511324 | 64088184 ~ 64092123 (-) | True | rab5if |
| XM_036947537.1 | mRNA | upstream | 531135 | 64107995 ~ 64145663 (-) | False | plcg1 |
| XM_036947538.1 | mRNA | upstream | 531135 | 64107995 ~ 64145664 (-) | False | plcg1 |
| TU1598025 | other | downstream | 191385 | 63384849 ~ 63385262 (-) | True | G1399367 |
| TU1597892 | other | downstream | 284446 | 63199119 ~ 63292201 (-) | True | G1399235 |
| TU1597246 | other | downstream | 841078 | 62734743 ~ 62735569 (-) | True | G1398619 |
| TU1594840 | other | downstream | 2821776 | 60753105 ~ 60754871 (-) | True | abhd6b |
| TU1594806 | other | downstream | 2882611 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1599309 | other | upstream | 526510 | 64103370 ~ 64105039 (-) | True | G1400503 |
| TU1599365 | other | upstream | 680066 | 64256926 ~ 64257433 (-) | True | G1400552 |
| TU1599377 | other | upstream | 707347 | 64284207 ~ 64284547 (-) | True | G1400564 |
| TU1599378 | other | upstream | 708768 | 64285628 ~ 64285993 (-) | True | G1400565 |
| TU1599394 | other | upstream | 733023 | 64309883 ~ 64310456 (-) | True | G1400578 |
