Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1598357 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1399679 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 63674343 ~ 63674588 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1598352 | lncRNA | downstream | 4429 | 63669678 ~ 63669914 (-) | True | G1399674 |
| TU1598324 | lncRNA | downstream | 22717 | 63651402 ~ 63651626 (-) | True | G1399646 |
| TU1598303 | lncRNA | downstream | 35217 | 63638829 ~ 63639126 (-) | True | G1399625 |
| TU1598302 | lncRNA | downstream | 35567 | 63638576 ~ 63638776 (-) | True | G1399624 |
| TU1598301 | lncRNA | downstream | 36208 | 63637847 ~ 63638135 (-) | True | G1399623 |
| TU1598360 | lncRNA | upstream | 1484 | 63676072 ~ 63676867 (-) | True | G1399682 |
| TU1598363 | lncRNA | upstream | 3542 | 63678130 ~ 63678597 (-) | True | G1399685 |
| TU1598370 | lncRNA | upstream | 8104 | 63682692 ~ 63682950 (-) | True | G1399691 |
| TU1598374 | lncRNA | upstream | 10932 | 63685520 ~ 63685973 (-) | True | G1399695 |
| TU1598390 | lncRNA | upstream | 22366 | 63696954 ~ 63697189 (-) | True | G1399711 |
| XM_021566908.2 | mRNA | downstream | 244816 | 63424911 ~ 63429527 (-) | True | LOC110492520 |
| XM_021566909.2 | mRNA | downstream | 244864 | 63424911 ~ 63429479 (-) | False | LOC110492520 |
| XM_036947533.1 | mRNA | downstream | 665844 | 62959965 ~ 63008499 (-) | True | b4galt5 |
| XM_036947534.1 | mRNA | downstream | 683364 | 62959965 ~ 62990979 (-) | False | b4galt5 |
| XM_036947529.1 | mRNA | downstream | 1008837 | 62469950 ~ 62665506 (-) | True | LOC118939569 |
| XM_036947536.1 | mRNA | upstream | 389662 | 64064250 ~ 64081609 (-) | True | LOC110492523 |
| LOC118939600 | mRNA | upstream | 391598 | 64066186 ~ 64066289 (-) | True | LOC118939600 |
| XM_021566915.2 | mRNA | upstream | 413596 | 64088184 ~ 64092123 (-) | True | rab5if |
| XM_036947537.1 | mRNA | upstream | 433407 | 64107995 ~ 64145663 (-) | False | plcg1 |
| XM_036947538.1 | mRNA | upstream | 433407 | 64107995 ~ 64145664 (-) | False | plcg1 |
| TU1598025 | other | downstream | 289081 | 63384849 ~ 63385262 (-) | True | G1399367 |
| TU1597892 | other | downstream | 382142 | 63199119 ~ 63292201 (-) | True | G1399235 |
| TU1597246 | other | downstream | 938774 | 62734743 ~ 62735569 (-) | True | G1398619 |
| TU1594840 | other | downstream | 2919472 | 60753105 ~ 60754871 (-) | True | abhd6b |
| TU1594806 | other | downstream | 2980307 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1599309 | other | upstream | 428782 | 64103370 ~ 64105039 (-) | True | G1400503 |
| TU1599365 | other | upstream | 582338 | 64256926 ~ 64257433 (-) | True | G1400552 |
| TU1599377 | other | upstream | 609619 | 64284207 ~ 64284547 (-) | True | G1400564 |
| TU1599378 | other | upstream | 611040 | 64285628 ~ 64285993 (-) | True | G1400565 |
| TU1599394 | other | upstream | 635295 | 64309883 ~ 64310456 (-) | True | G1400578 |
