Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1598390 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G1399711 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 63696954 ~ 63697189 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1598374 | lncRNA | downstream | 10981 | 63685520 ~ 63685973 (-) | True | G1399695 |
| TU1598370 | lncRNA | downstream | 14004 | 63682692 ~ 63682950 (-) | True | G1399691 |
| TU1598363 | lncRNA | downstream | 18357 | 63678130 ~ 63678597 (-) | True | G1399685 |
| TU1598360 | lncRNA | downstream | 20087 | 63676072 ~ 63676867 (-) | True | G1399682 |
| TU1598357 | lncRNA | downstream | 22366 | 63674343 ~ 63674588 (-) | True | G1399679 |
| TU1598392 | lncRNA | upstream | 529 | 63697718 ~ 63697937 (-) | True | G1399713 |
| TU1598397 | lncRNA | upstream | 4648 | 63701837 ~ 63702152 (-) | True | G1399718 |
| TU1598419 | lncRNA | upstream | 28222 | 63725411 ~ 63725711 (-) | True | G1399740 |
| TU1598427 | lncRNA | upstream | 31834 | 63729023 ~ 63729400 (-) | True | G1399748 |
| TU1598580 | lncRNA | upstream | 95558 | 63792747 ~ 63854885 (-) | True | G1399895 |
| XM_021566908.2 | mRNA | downstream | 267427 | 63424911 ~ 63429527 (-) | True | LOC110492520 |
| XM_021566909.2 | mRNA | downstream | 267475 | 63424911 ~ 63429479 (-) | False | LOC110492520 |
| XM_036947533.1 | mRNA | downstream | 688455 | 62959965 ~ 63008499 (-) | True | b4galt5 |
| XM_036947534.1 | mRNA | downstream | 705975 | 62959965 ~ 62990979 (-) | False | b4galt5 |
| XM_036947529.1 | mRNA | downstream | 1031448 | 62469950 ~ 62665506 (-) | True | LOC118939569 |
| XM_036947536.1 | mRNA | upstream | 367061 | 64064250 ~ 64081609 (-) | True | LOC110492523 |
| LOC118939600 | mRNA | upstream | 368997 | 64066186 ~ 64066289 (-) | True | LOC118939600 |
| XM_021566915.2 | mRNA | upstream | 390995 | 64088184 ~ 64092123 (-) | True | rab5if |
| XM_036947537.1 | mRNA | upstream | 410806 | 64107995 ~ 64145663 (-) | False | plcg1 |
| XM_036947538.1 | mRNA | upstream | 410806 | 64107995 ~ 64145664 (-) | False | plcg1 |
| TU1598025 | other | downstream | 311692 | 63384849 ~ 63385262 (-) | True | G1399367 |
| TU1597892 | other | downstream | 404753 | 63199119 ~ 63292201 (-) | True | G1399235 |
| TU1597246 | other | downstream | 961385 | 62734743 ~ 62735569 (-) | True | G1398619 |
| TU1594840 | other | downstream | 2942083 | 60753105 ~ 60754871 (-) | True | abhd6b |
| TU1594806 | other | downstream | 3002918 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1599309 | other | upstream | 406181 | 64103370 ~ 64105039 (-) | True | G1400503 |
| TU1599365 | other | upstream | 559737 | 64256926 ~ 64257433 (-) | True | G1400552 |
| TU1599377 | other | upstream | 587018 | 64284207 ~ 64284547 (-) | True | G1400564 |
| TU1599378 | other | upstream | 588439 | 64285628 ~ 64285993 (-) | True | G1400565 |
| TU1599394 | other | upstream | 612694 | 64309883 ~ 64310456 (-) | True | G1400578 |
