Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1599471 |
| length | 298 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1400639 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 64403701 ~ 64403998 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1599369 | lncRNA | downstream | 134151 | 64269218 ~ 64269550 (-) | True | G1400556 |
| TU1599331 | lncRNA | downstream | 143133 | 64260281 ~ 64260568 (-) | True | G1400520 |
| TU1599318 | lncRNA | downstream | 159041 | 64220388 ~ 64244660 (-) | True | LOC110492532 |
| TU1599355 | lncRNA | downstream | 193499 | 64208995 ~ 64210202 (-) | True | G1400542 |
| TU1599354 | lncRNA | downstream | 193973 | 64208995 ~ 64209728 (-) | False | G1400542 |
| TU1599484 | lncRNA | upstream | 25712 | 64429710 ~ 64430791 (-) | True | G1400652 |
| TU1599489 | lncRNA | upstream | 45404 | 64449402 ~ 64450195 (-) | True | G1400655 |
| TU1599504 | lncRNA | upstream | 65063 | 64469061 ~ 64469500 (-) | True | G1400670 |
| TU1599511 | lncRNA | upstream | 77858 | 64481856 ~ 64482510 (-) | True | G1400676 |
| TU1599438 | lncRNA | upstream | 82871 | 64486869 ~ 64488384 (-) | True | G1400619 |
| XM_036947545.1 | mRNA | downstream | 6292 | 64391628 ~ 64397409 (-) | True | LOC110492537 |
| XM_021566940.2 | mRNA | downstream | 12363 | 64348245 ~ 64391338 (-) | True | LOC110492536 |
| XM_021566938.2 | mRNA | downstream | 61426 | 64316220 ~ 64342275 (-) | True | LOC110492535 |
| XM_021566937.2 | mRNA | downstream | 61451 | 64316220 ~ 64342250 (-) | False | LOC110492535 |
| XM_021566929.2 | mRNA | downstream | 167202 | 64220384 ~ 64236499 (-) | False | LOC110492532 |
| XM_036947549.1 | mRNA | upstream | 42800 | 64446798 ~ 64485638 (-) | False | si:ch211-117c9.5 |
| XM_021566944.2 | mRNA | upstream | 87385 | 64491383 ~ 64514012 (-) | True | LOC110492541 |
| NM_001124225.1 | mRNA | upstream | 241403 | 64645401 ~ 64650567 (-) | True | parapinopsina |
| XM_036947558.1 | mRNA | upstream | 249792 | 64653790 ~ 64666518 (-) | True | LOC110492546 |
| XM_021566947.2 | mRNA | upstream | 262726 | 64666724 ~ 64673620 (-) | False | LOC110492543 |
| TU1599394 | other | downstream | 93245 | 64309883 ~ 64310456 (-) | True | G1400578 |
| TU1599378 | other | downstream | 117708 | 64285628 ~ 64285993 (-) | True | G1400565 |
| TU1599377 | other | downstream | 119154 | 64284207 ~ 64284547 (-) | True | G1400564 |
| TU1599365 | other | downstream | 146268 | 64256926 ~ 64257433 (-) | True | G1400552 |
| TU1599309 | other | downstream | 298662 | 64103370 ~ 64105039 (-) | True | G1400503 |
| TU1599433 | other | upstream | 41357 | 64445355 ~ 64448472 (-) | True | si:ch211-117c9.5 |
| TU1600638 | other | upstream | 1231484 | 65635482 ~ 65636372 (-) | True | G1401617 |
| TU1600365 | other | upstream | 1316509 | 65720507 ~ 65754610 (-) | True | LOC110492562 |
| TU1601912 | other | upstream | 2021553 | 66425551 ~ 66426322 (-) | False | G1402686 |
| TU1601915 | other | upstream | 2021553 | 66425551 ~ 66426322 (-) | True | G1402686 |
