Item | Value |
---|---|
RNA id | TU1599841 |
length | 223 |
lncRNA type | inter_gene |
GC content | 0.48 |
exon number | 1 |
gene id | G1400942 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048580.1 |
NCBI id | CM023234.2 |
chromosome length | 78541548 |
location | 65056586 ~ 65056808 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1599832 | lncRNA | downstream | 17855 | 65038300 ~ 65038731 (-) | True | G1400933 |
TU1599802 | lncRNA | downstream | 83980 | 64966626 ~ 64972606 (-) | False | G1400907 |
TU1599800 | lncRNA | downstream | 87868 | 64967837 ~ 64968718 (-) | True | G1400907 |
TU1599792 | lncRNA | downstream | 100676 | 64954598 ~ 64955910 (-) | True | G1400904 |
TU1599754 | lncRNA | downstream | 149029 | 64906896 ~ 64907557 (-) | True | G1400877 |
TU1599845 | lncRNA | upstream | 1845 | 65058653 ~ 65058890 (-) | True | G1400946 |
TU1599852 | lncRNA | upstream | 6008 | 65062816 ~ 65063036 (-) | True | G1400953 |
TU1599861 | lncRNA | upstream | 16393 | 65073201 ~ 65073430 (-) | True | G1400962 |
TU1599877 | lncRNA | upstream | 25396 | 65082204 ~ 65082623 (-) | True | G1400978 |
TU1599889 | lncRNA | upstream | 36675 | 65093483 ~ 65094258 (-) | True | G1400990 |
XM_021566949.2 | mRNA | downstream | 65115 | 64984262 ~ 64991471 (-) | True | LOC110492545 |
XM_021566948.2 | mRNA | downstream | 368005 | 64682618 ~ 64688581 (-) | True | LOC110492544 |
XM_021566947.2 | mRNA | downstream | 382966 | 64666724 ~ 64673620 (-) | False | LOC110492543 |
XM_036947557.1 | mRNA | downstream | 382966 | 64671770 ~ 64673620 (-) | True | LOC110492543 |
XM_036947558.1 | mRNA | downstream | 390068 | 64653790 ~ 64666518 (-) | True | LOC110492546 |
XM_036947560.1 | mRNA | upstream | 37981 | 65094789 ~ 65129767 (-) | True | wnt5a |
XM_036947561.1 | mRNA | upstream | 74842 | 65131650 ~ 65620292 (-) | False | LOC110518541 |
NM_001129991.2 | mRNA | upstream | 566367 | 65623175 ~ 65628493 (-) | True | tlr9 |
XM_021566961.2 | mRNA | upstream | 576322 | 65633130 ~ 65644141 (-) | False | apeh |
XM_021566962.2 | mRNA | upstream | 576322 | 65633130 ~ 65644141 (-) | True | apeh |
TU1599433 | other | downstream | 608114 | 64445355 ~ 64448472 (-) | True | si:ch211-117c9.5 |
TU1599394 | other | downstream | 746130 | 64309883 ~ 64310456 (-) | True | G1400578 |
TU1599378 | other | downstream | 770593 | 64285628 ~ 64285993 (-) | True | G1400565 |
TU1599377 | other | downstream | 772039 | 64284207 ~ 64284547 (-) | True | G1400564 |
TU1599365 | other | downstream | 799153 | 64256926 ~ 64257433 (-) | True | G1400552 |
TU1600638 | other | upstream | 578674 | 65635482 ~ 65636372 (-) | True | G1401617 |
TU1600365 | other | upstream | 663699 | 65720507 ~ 65754610 (-) | True | LOC110492562 |
TU1601912 | other | upstream | 1368743 | 66425551 ~ 66426322 (-) | False | G1402686 |
TU1601915 | other | upstream | 1368743 | 66425551 ~ 66426322 (-) | True | G1402686 |
TU1601943 | other | upstream | 1428093 | 66484901 ~ 66494667 (-) | False | G1402707 |