Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1600654 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1401632 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65705747 ~ 65705961 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1600371 | lncRNA | downstream | 50892 | 65654617 ~ 65654855 (-) | True | G1401378 |
| TU1600368 | lncRNA | downstream | 51813 | 65648396 ~ 65653934 (-) | True | G1401376 |
| TU1600630 | lncRNA | downstream | 88502 | 65616811 ~ 65617245 (-) | True | G1401611 |
| TU1600623 | lncRNA | downstream | 100855 | 65604227 ~ 65604892 (-) | False | G1401606 |
| TU1600624 | lncRNA | downstream | 100855 | 65604227 ~ 65604892 (-) | True | G1401606 |
| TU1600378 | lncRNA | upstream | 2664 | 65708625 ~ 65709149 (-) | True | G1401383 |
| TU1600363 | lncRNA | upstream | 14546 | 65720507 ~ 65754363 (-) | False | LOC110492562 |
| TU1600691 | lncRNA | upstream | 139376 | 65845337 ~ 65847509 (-) | True | G1401667 |
| TU1600719 | lncRNA | upstream | 177265 | 65883226 ~ 65883433 (-) | True | G1401692 |
| TU1600729 | lncRNA | upstream | 197598 | 65903559 ~ 65903883 (-) | True | G1401702 |
| XM_036947562.1 | mRNA | downstream | 969 | 65660280 ~ 65704778 (-) | True | cttnbp2nlb |
| XM_021566961.2 | mRNA | downstream | 61606 | 65633130 ~ 65644141 (-) | False | apeh |
| XM_021566962.2 | mRNA | downstream | 61606 | 65633130 ~ 65644141 (-) | True | apeh |
| NM_001129991.2 | mRNA | downstream | 77254 | 65623175 ~ 65628493 (-) | True | tlr9 |
| XM_036947561.1 | mRNA | downstream | 85455 | 65131650 ~ 65620292 (-) | False | LOC110518541 |
| XM_036947564.1 | mRNA | upstream | 9750 | 65715711 ~ 65740776 (-) | False | LOC110492562 |
| XM_036947563.1 | mRNA | upstream | 14206 | 65720167 ~ 65740775 (-) | False | LOC110492562 |
| XM_021566966.2 | mRNA | upstream | 563676 | 66269637 ~ 66276483 (-) | True | ddx20 |
| XM_036947568.1 | mRNA | upstream | 574995 | 66280956 ~ 66296439 (-) | True | LOC110492566 |
| XM_021566970.2 | mRNA | upstream | 597628 | 66303589 ~ 66308067 (-) | True | b4galt3 |
| TU1600638 | other | downstream | 69375 | 65635482 ~ 65636372 (-) | True | G1401617 |
| TU1599433 | other | downstream | 1257275 | 64445355 ~ 64448472 (-) | True | si:ch211-117c9.5 |
| TU1599394 | other | downstream | 1395291 | 64309883 ~ 64310456 (-) | True | G1400578 |
| TU1599378 | other | downstream | 1419754 | 64285628 ~ 64285993 (-) | True | G1400565 |
| TU1599377 | other | downstream | 1421200 | 64284207 ~ 64284547 (-) | True | G1400564 |
| TU1600365 | other | upstream | 14546 | 65720507 ~ 65754610 (-) | True | LOC110492562 |
| TU1601912 | other | upstream | 719590 | 66425551 ~ 66426322 (-) | False | G1402686 |
| TU1601915 | other | upstream | 719590 | 66425551 ~ 66426322 (-) | True | G1402686 |
| TU1601943 | other | upstream | 778940 | 66484901 ~ 66494667 (-) | False | G1402707 |
| TU1602806 | other | upstream | 1737460 | 67443421 ~ 67444179 (-) | True | G1403498 |
