Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1602546 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G1403261 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 67364805 ~ 67365121 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1602544 | lncRNA | downstream | 555 | 67363079 ~ 67364250 (-) | True | G1403259 |
| TU1602541 | lncRNA | downstream | 4500 | 67360038 ~ 67360305 (-) | True | G1403256 |
| TU1602489 | lncRNA | downstream | 38539 | 67326058 ~ 67326266 (-) | True | G1403214 |
| TU1602487 | lncRNA | downstream | 41547 | 67322954 ~ 67323258 (-) | True | G1403212 |
| TU1602475 | lncRNA | downstream | 48328 | 67316160 ~ 67316477 (-) | True | G1403200 |
| TU1602562 | lncRNA | upstream | 15648 | 67380769 ~ 67381040 (-) | True | G1403277 |
| TU1602565 | lncRNA | upstream | 17540 | 67382661 ~ 67382879 (-) | True | G1403280 |
| TU1602785 | lncRNA | upstream | 40070 | 67405191 ~ 67405553 (-) | True | G1403477 |
| TU1602786 | lncRNA | upstream | 40667 | 67405788 ~ 67406168 (-) | True | G1403478 |
| TU1602812 | lncRNA | upstream | 95126 | 67460247 ~ 67461402 (-) | True | G1403504 |
| XM_036947591.1 | mRNA | downstream | 331760 | 67021935 ~ 67033045 (-) | True | LOC110492588 |
| XM_021567004.2 | mRNA | downstream | 331773 | 67021935 ~ 67033032 (-) | False | LOC110492588 |
| XM_036947592.1 | mRNA | downstream | 336027 | 67021935 ~ 67028778 (-) | False | LOC110492588 |
| XM_036947589.1 | mRNA | downstream | 352644 | 66822334 ~ 67012161 (-) | False | LOC110492586 |
| XM_036947601.1 | mRNA | upstream | 106823 | 67471944 ~ 67492651 (-) | False | LOC110492592 |
| XM_036947602.1 | mRNA | upstream | 106823 | 67471944 ~ 67492651 (-) | True | LOC110492592 |
| XM_021567018.2 | mRNA | upstream | 134544 | 67499665 ~ 67510144 (-) | True | LOC110492594 |
| XM_036947610.1 | mRNA | upstream | 147377 | 67512498 ~ 67535761 (-) | False | LOC110492595 |
| XM_021567021.2 | mRNA | upstream | 147377 | 67512498 ~ 67571084 (-) | False | LOC110492595 |
| TU1601943 | other | downstream | 870138 | 66484901 ~ 66494667 (-) | False | G1402707 |
| TU1601912 | other | downstream | 938483 | 66425551 ~ 66426322 (-) | False | G1402686 |
| TU1601915 | other | downstream | 938483 | 66425551 ~ 66426322 (-) | True | G1402686 |
| TU1600365 | other | downstream | 1610195 | 65720507 ~ 65754610 (-) | True | LOC110492562 |
| TU1600638 | other | downstream | 1728433 | 65635482 ~ 65636372 (-) | True | G1401617 |
| TU1602806 | other | upstream | 78300 | 67443421 ~ 67444179 (-) | True | G1403498 |
| TU1604092 | other | upstream | 1426068 | 68791189 ~ 68795025 (-) | True | LOC118939478 |
| TU1604570 | other | upstream | 1838165 | 69203286 ~ 69207158 (-) | True | G1404974 |
| TU1604630 | other | upstream | 1912706 | 69277827 ~ 69280359 (-) | True | G1405016 |
| TU1604821 | other | upstream | 2152634 | 69517755 ~ 69518113 (-) | True | G1405172 |
