RNA id: TU1603836


Basic Information

Item Value
RNA id TU1603836
length 210
lncRNA type read_through
GC content 0.43
exon number 2
gene id G1404367
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68325731 ~ 68326012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tgctgaatacaacaggtgtagtagaccgtagtgtactgctgaatacaacaggtgtagtagaccttagtgtactgctgaataaaacaggtgtaggagaccgtagtgtactgctgaatacaacaggtgtagtagaccgtagtgtactgctgaatacaacaggtgtagtagaccttagtgtactgctgaatacaacaggtgtagtagaccgta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1603448 lncRNA downstream 109483 68216018 ~ 68216248 (-) True G1404061
TU1603443 lncRNA downstream 111625 68213291 ~ 68214106 (-) False G1404059
TU1603445 lncRNA downstream 111625 68213291 ~ 68214106 (-) False G1404059
TU1603446 lncRNA downstream 111625 68213291 ~ 68214106 (-) True G1404059
TU1603418 lncRNA downstream 135469 68190025 ~ 68190262 (-) True G1404035
TU1603837 lncRNA upstream 1634 68327646 ~ 68327903 (-) True G1404368
TU1603842 lncRNA upstream 8529 68334541 ~ 68334953 (-) True G1404373
TU1603854 lncRNA upstream 33361 68359373 ~ 68359652 (-) True G1404385
TU1603782 lncRNA upstream 42971 68368983 ~ 68369804 (-) True G1404321
TU1603869 lncRNA upstream 72107 68398119 ~ 68398401 (-) True G1404399
XR_005036608.1 mRNA downstream 53584 68265437 ~ 68272147 (-) False LOC110492615
XM_021567043.2 mRNA downstream 53584 68265441 ~ 68272147 (-) True LOC110492615
XM_036947643.1 mRNA downstream 60370 68249045 ~ 68265361 (-) True LOC110492616
XM_036947641.1 mRNA downstream 60386 68249045 ~ 68265345 (-) False LOC110492616
NM_001124722.1 mRNA downstream 141312 68183225 ~ 68184419 (-) True id1
XM_021567048.2 mRNA upstream 37162 68363174 ~ 68367397 (-) True LOC110492621
XM_036947635.1 mRNA upstream 43983 68369995 ~ 68378994 (-) False LOC110491166
XM_036947636.1 mRNA upstream 43983 68369995 ~ 68378994 (-) False LOC110491166
XM_036947637.1 mRNA upstream 43983 68369995 ~ 68381432 (-) False LOC110491166
XM_036947633.1 mRNA upstream 43983 68369995 ~ 68383907 (-) False LOC110491166
TU1602806 other downstream 881552 67443421 ~ 67444179 (-) True G1403498
TU1601943 other downstream 1831064 66484901 ~ 66494667 (-) False G1402707
TU1601912 other downstream 1899409 66425551 ~ 66426322 (-) False G1402686
TU1601915 other downstream 1899409 66425551 ~ 66426322 (-) True G1402686
TU1600365 other downstream 2571121 65720507 ~ 65754610 (-) True LOC110492562
TU1604092 other upstream 465177 68791189 ~ 68795025 (-) True LOC118939478
TU1604570 other upstream 877274 69203286 ~ 69207158 (-) True G1404974
TU1604630 other upstream 951815 69277827 ~ 69280359 (-) True G1405016
TU1604821 other upstream 1191743 69517755 ~ 69518113 (-) True G1405172
TU1605761 other upstream 1752645 70078657 ~ 70095541 (-) True G1405917

Expression Profile