Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1604106 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1404608 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 68886175 ~ 68886406 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1604085 | lncRNA | downstream | 97077 | 68788892 ~ 68789098 (-) | True | G1404588 |
| TU1604024 | lncRNA | downstream | 212641 | 68671413 ~ 68673534 (-) | True | LOC110492627 |
| TU1604035 | lncRNA | downstream | 233836 | 68648270 ~ 68652339 (-) | True | G1404543 |
| TU1604015 | lncRNA | downstream | 253398 | 68632537 ~ 68632777 (-) | True | G1404530 |
| TU1604014 | lncRNA | downstream | 253666 | 68632307 ~ 68632509 (-) | True | G1404529 |
| TU1604123 | lncRNA | upstream | 13958 | 68900364 ~ 68901492 (-) | True | G1404624 |
| TU1604147 | lncRNA | upstream | 18402 | 68904808 ~ 68907251 (-) | True | G1404634 |
| TU1604127 | lncRNA | upstream | 27223 | 68913629 ~ 68915352 (-) | False | G1404628 |
| TU1604129 | lncRNA | upstream | 27223 | 68913629 ~ 68915352 (-) | False | G1404628 |
| TU1604130 | lncRNA | upstream | 27223 | 68913629 ~ 68915352 (-) | False | G1404628 |
| XM_036945858.1 | mRNA | downstream | 92847 | 68791313 ~ 68793328 (-) | False | LOC118939478 |
| XM_036947619.1 | mRNA | downstream | 113922 | 68703920 ~ 68772253 (-) | False | LOC110492626 |
| XM_036947620.1 | mRNA | downstream | 113922 | 68703940 ~ 68772253 (-) | True | LOC110492626 |
| XR_005036598.1 | mRNA | downstream | 182572 | 68672839 ~ 68703603 (-) | False | LOC110492627 |
| XR_005036597.1 | mRNA | downstream | 182573 | 68672839 ~ 68703602 (-) | False | LOC110492627 |
| XM_021564517.2 | mRNA | upstream | 8575 | 68894981 ~ 68896120 (-) | True | LOC110491168 |
| XM_021567055.2 | mRNA | upstream | 29170 | 68915576 ~ 68917426 (-) | True | LOC110492630 |
| XM_036947659.1 | mRNA | upstream | 226610 | 69113016 ~ 69122652 (-) | False | LOC110492636 |
| XM_036947658.1 | mRNA | upstream | 226610 | 69113016 ~ 69123466 (-) | True | LOC110492636 |
| XM_036945796.1 | mRNA | upstream | 468096 | 69354502 ~ 69379181 (-) | True | LOC110492644 |
| TU1604092 | other | downstream | 91150 | 68791189 ~ 68795025 (-) | True | LOC118939478 |
| TU1602806 | other | downstream | 1441996 | 67443421 ~ 67444179 (-) | True | G1403498 |
| TU1601943 | other | downstream | 2391508 | 66484901 ~ 66494667 (-) | False | G1402707 |
| TU1601912 | other | downstream | 2459853 | 66425551 ~ 66426322 (-) | False | G1402686 |
| TU1601915 | other | downstream | 2459853 | 66425551 ~ 66426322 (-) | True | G1402686 |
| TU1604570 | other | upstream | 316880 | 69203286 ~ 69207158 (-) | True | G1404974 |
| TU1604630 | other | upstream | 391421 | 69277827 ~ 69280359 (-) | True | G1405016 |
| TU1604821 | other | upstream | 631349 | 69517755 ~ 69518113 (-) | True | G1405172 |
| TU1605761 | other | upstream | 1192251 | 70078657 ~ 70095541 (-) | True | G1405917 |
| TU1605893 | other | upstream | 1333471 | 70219877 ~ 70221256 (-) | True | LOC110492660 |
