Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1604108 |
| length | 316 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G1404609 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 68887035 ~ 68890355 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1603720 | lncRNA | upstream | 200150 | 68683019 ~ 68686885 (+) | True | G1404283 |
| TU1603711 | lncRNA | upstream | 206538 | 68680025 ~ 68680497 (+) | True | G1404280 |
| TU1603702 | lncRNA | upstream | 208064 | 68676022 ~ 68678971 (+) | True | G1404271 |
| TU1603704 | lncRNA | upstream | 214433 | 68658353 ~ 68672602 (+) | True | G1404273 |
| TU1603688 | lncRNA | upstream | 257383 | 68629449 ~ 68629652 (+) | True | G1404259 |
| TU1604112 | lncRNA | downstream | 1040 | 68891395 ~ 68891650 (+) | True | G1404613 |
| TU1604114 | lncRNA | downstream | 2703 | 68893058 ~ 68893827 (+) | True | G1404615 |
| TU1604151 | lncRNA | downstream | 28695 | 68919050 ~ 68919289 (+) | True | G1404637 |
| TU1604154 | lncRNA | downstream | 33108 | 68923463 ~ 68923913 (+) | True | G1404640 |
| TU1604158 | lncRNA | downstream | 34649 | 68925004 ~ 68925243 (+) | True | G1404644 |
| XM_036947632.1 | mRNA | upstream | 455291 | 68422113 ~ 68431744 (+) | True | LOC110492623 |
| XM_036947640.1 | mRNA | upstream | 481844 | 68396762 ~ 68405191 (+) | False | LOC110492622 |
| XM_036947639.1 | mRNA | upstream | 481844 | 68396763 ~ 68405191 (+) | True | LOC110492622 |
| XM_021564513.2 | mRNA | upstream | 529866 | 68348773 ~ 68357169 (+) | True | LOC110491164 |
| XR_005036609.1 | mRNA | upstream | 542022 | 68301028 ~ 68345013 (+) | False | LOC110492620 |
| XM_021567053.2 | mRNA | downstream | 14455 | 68904810 ~ 68909231 (+) | True | LOC110492628 |
| XM_021567054.2 | mRNA | downstream | 22532 | 68912887 ~ 68915377 (+) | False | LOC110492629 |
| XM_036947648.1 | mRNA | downstream | 23538 | 68913893 ~ 68915383 (+) | True | LOC110492629 |
| XM_036947649.1 | mRNA | downstream | 41778 | 68932133 ~ 68934318 (+) | True | LOC118939574 |
| XM_021567057.2 | mRNA | downstream | 67210 | 68957565 ~ 68961010 (+) | True | LOC110492631 |
| TU1603714 | other | upstream | 205058 | 68681446 ~ 68681977 (+) | True | G1404281 |
| TU1603494 | other | upstream | 543540 | 68319655 ~ 68343495 (+) | True | LOC110492620 |
| TU1603513 | other | upstream | 596949 | 68289515 ~ 68290086 (+) | False | G1404105 |
| TU1602989 | other | upstream | 1109544 | 67773556 ~ 67777491 (+) | True | G1403655 |
| TU1602769 | other | upstream | 1147333 | 67738962 ~ 67739702 (+) | True | G1403463 |
| TU1604245 | other | downstream | 219359 | 69109714 ~ 69113350 (+) | False | G1404700 |
| TU1604341 | other | downstream | 355190 | 69245545 ~ 69253709 (+) | True | G1404785 |
| TU1604359 | other | downstream | 415341 | 69305696 ~ 69312263 (+) | False | fkbp1ab |
| TU1604360 | other | downstream | 415341 | 69305696 ~ 69312263 (+) | True | fkbp1ab |
| TU1604386 | other | downstream | 474166 | 69364521 ~ 69369376 (+) | True | G1404827 |
