RNA id: TU1611526


Basic Information

Item Value
RNA id TU1611526
length 963
lncRNA type intronic
GC content 0.40
exon number 6
gene id G1410422
representative False

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 75997919 ~ 76008316 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tagagtagagtagagtagagtagagtagagtagagtagagtagagtagagtagagtagtgtagagtagtgtagagtagagtagagtagagtagagtagtgtagagtagtgtagagtagactagtgtagagtagagtagagtagagtagagtagagtagtgtagagtagagtagtgtagagtagtgtagagtagagtagtgtagagtagagtagagtagtgtagagtagagtagtgtagagtagtgtagagtagagtagtgtagagtagtgtagagtagtgtagagtagtgtagagtagtgtagagtagagtagtgtagagtagagtagagtagagtagtgtagagtagagtagtgtagagtagtgtagagtagagtagtgtagagtagagtagagtagtgtagagtagagtagtgtagagtagagtagtgtagagtagagtagtgtagagtagagtagagtagtgtagagtagagtagagtagagtagtgtagtgtagtgtagagtagtgtagagtagagtagagtagagtagagtagagtagtgtagagtagagtagactagagtagagtagagtagagtagagtagagtagagtagtgtagtgtagtgtagagtagagtagagtagtgtagtgtagagtagactagagtagagtagagtagagtagagtagagtagtgtagtgtagtgtagtgtagagtagagtagagtagtgtagagtagactagagtagagtagagtagagtagagtagagtagtgtagtgtagagtagactagagtagagtagagtagagtagagtagtgtagtgtagtgtagtgtagagtagagtagagtagtgtagagtagactagagtagagtagagtagagtagagtagagtagtgtagtgtagtgtagtgtagagtagagtagagtagagtagagtagagtagagtagagtagtgtagagtagactagagtag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1611501 lncRNA downstream 27776 75969196 ~ 75970143 (-) True G1410402
TU1611371 lncRNA downstream 36392 75961318 ~ 75961527 (-) True G1410298
TU1611363 lncRNA downstream 52073 75945594 ~ 75945846 (-) True G1410290
TU1611352 lncRNA downstream 56117 75940707 ~ 75941802 (-) False G1410288
TU1611358 lncRNA downstream 56117 75940707 ~ 75941802 (-) True G1410288
TU1611538 lncRNA upstream 11736 76020052 ~ 76020467 (-) True G1410428
TU1611586 lncRNA upstream 83115 76091431 ~ 76094052 (-) True G1410465
TU1611589 lncRNA upstream 91351 76099667 ~ 76100856 (-) True G1410468
TU1611592 lncRNA upstream 92711 76101027 ~ 76102220 (-) True G1410470
TU1611594 lncRNA upstream 99727 76108043 ~ 76109361 (-) True G1410472
XM_036947815.1 mRNA downstream 382797 75600034 ~ 75615122 (-) True LOC110492917
XR_005036630.1 mRNA downstream 382819 75600034 ~ 75615100 (-) False LOC110492917
XM_036945806.1 mRNA downstream 625014 75371620 ~ 75372905 (-) True LOC118939468
XM_021564530.2 mRNA downstream 950946 75029607 ~ 75046973 (-) True LOC110491183
XM_036947809.1 mRNA downstream 982540 74986625 ~ 75015379 (-) True irak1
XM_036947820.1 mRNA upstream 95893 76104209 ~ 76119590 (-) False LOC110492699
XM_036947827.1 mRNA upstream 552941 76561257 ~ 76637349 (-) False LOC110492709
XM_036947824.1 mRNA upstream 552941 76561257 ~ 76642094 (-) False LOC110492709
XM_036947825.1 mRNA upstream 552941 76561257 ~ 76642094 (-) False LOC110492709
XM_036947826.1 mRNA upstream 552941 76561257 ~ 76642094 (-) False LOC110492709
TU1611355 other downstream 56117 75940707 ~ 75941802 (-) False G1410288
TU1611257 other downstream 133463 75863829 ~ 75864456 (-) False G1410213
TU1611228 other downstream 241440 75755778 ~ 75756479 (-) True G1410190
TU1610916 other downstream 562379 75435054 ~ 75435540 (-) True G1409928
TU1610805 other downstream 628296 75368890 ~ 75369623 (-) True G1409847
TU1611577 other upstream 52753 76061069 ~ 76061732 (-) True G1410456
TU1611591 other upstream 95931 76104247 ~ 76111098 (-) True LOC110492699
TU1611610 other upstream 156327 76164643 ~ 76165488 (-) True G1410487
TU1611696 other upstream 244905 76253221 ~ 76278240 (-) False G1410557
TU1611711 other upstream 244905 76253221 ~ 76259046 (-) False G1410557

Expression Profile