RNA id: TU1611714


Basic Information

Item Value
RNA id TU1611714
length 544
RNA type TUCP
GC content 0.37
exon number 3
gene id G1410557
representative False

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76253221 ~ 76311947 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

atcaggactgttatccacatggagataaaagaggagacatcaggtctattatccacatggagataaaagacatcagatcaggtctgttatccacatggaactaaaagacatcaggtctattatccacatggaactaaaagacatcaggtctgttatccacatggaactaaaatacatcaggtctattatccacatggaactaaaagacatcaggtctattatcaacatggaactaaaagacatcaggtctattatccacatggaactaaaagacatcaggtctattatccacatggaactaaaagacatcaggtctgttatccacatggaactaaaagacatcaggtctattatccacatggaactaaaagacatcaggtctattatccacatggagataaaagacatcaggtctattatccacatggaactaaaagacatcaggtctattatccacatggaactaaaagacatcaggtctattatccacatggaactaaagaggagacatcaggtctattatccacatggaactaaaagagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1611642 lncRNA downstream 2685 76208228 ~ 76252231 (-) False G1410518
TU1611641 lncRNA downstream 36816 76216525 ~ 76218100 (-) True G1410518
TU1611645 lncRNA downstream 39992 76210563 ~ 76214924 (-) True G1410520
TU1611618 lncRNA downstream 59883 76194744 ~ 76195033 (-) True G1410495
TU1611600 lncRNA downstream 126821 76127781 ~ 76128095 (-) True G1410478
TU1611700 lncRNA upstream 12517 76286542 ~ 76299383 (-) False G1410557
TU1611725 lncRNA upstream 14340 76288365 ~ 76308166 (-) True G1410562
TU1611730 lncRNA upstream 48251 76322276 ~ 76324000 (-) True G1410567
TU1611735 lncRNA upstream 63505 76337530 ~ 76337854 (-) True G1410571
TU1611740 lncRNA upstream 91538 76365563 ~ 76366016 (-) True G1410573
XM_036947820.1 mRNA downstream 135326 76104209 ~ 76119590 (-) False LOC110492699
XM_036947815.1 mRNA downstream 639794 75600034 ~ 75615122 (-) True LOC110492917
XR_005036630.1 mRNA downstream 639816 75600034 ~ 75615100 (-) False LOC110492917
XM_036945806.1 mRNA downstream 882011 75371620 ~ 75372905 (-) True LOC118939468
XM_021564530.2 mRNA downstream 1207943 75029607 ~ 75046973 (-) True LOC110491183
XM_036947827.1 mRNA upstream 287232 76561257 ~ 76637349 (-) False LOC110492709
XM_036947824.1 mRNA upstream 287232 76561257 ~ 76642094 (-) False LOC110492709
XM_036947825.1 mRNA upstream 287232 76561257 ~ 76642094 (-) False LOC110492709
XM_036947826.1 mRNA upstream 287232 76561257 ~ 76642094 (-) False LOC110492709
XR_005036632.1 mRNA upstream 287232 76561257 ~ 76642094 (-) True LOC110492709
TU1611610 other downstream 89428 76164643 ~ 76165488 (-) True G1410487
TU1611591 other downstream 143818 76104247 ~ 76111098 (-) True LOC110492699
TU1611577 other downstream 193184 76061069 ~ 76061732 (-) True G1410456
TU1611355 other downstream 313114 75940707 ~ 75941802 (-) False G1410288
TU1611257 other downstream 390460 75863829 ~ 75864456 (-) False G1410213
TU1611706 other upstream 16130 76290155 ~ 76311947 (-) True G1410557
TU1611897 other upstream 283015 76557040 ~ 76558174 (-) False G1410696
TU1611910 other upstream 368755 76642780 ~ 76645664 (-) True G1410701
TU1612017 other upstream 518395 76792420 ~ 76795053 (-) True G1410773
TU1612024 other upstream 521558 76795583 ~ 76795880 (-) False G1410776

Expression Profile