RNA id: TU1611725



Basic Information


Item Value
RNA id TU1611725
length 309
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G1410562
representative True

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76288365 ~ 76308166 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gacatcaggtctgttatccacatggaactaaaatacatcaggtctattatccacatggaactaaaagacatcaggtctattatccacatggaaatAAAAGAcagcaggtctattatccacatggagataaaagaggagacatcaggtctattatccacatggagataagggacatcaggtctattatccacatggaactaaaagacatcagttctattatccacatggaacttaaagacatcaggtctgttatccacatggagataaaagaggagacatcaggtctattatccacatggagataaaaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1611697 lncRNA downstream 6018 76253221 ~ 76282347 (-) False G1410557
TU1611708 lncRNA downstream 8186 76253741 ~ 76280179 (-) False G1410557
TU1611702 lncRNA downstream 11884 76254916 ~ 76276481 (-) False G1410557
TU1611721 lncRNA downstream 27704 76256976 ~ 76260661 (-) True G1410558
TU1611703 lncRNA downstream 29319 76253221 ~ 76259046 (-) False G1410557
TU1611730 lncRNA upstream 14110 76322276 ~ 76324000 (-) True G1410567
TU1611735 lncRNA upstream 29364 76337530 ~ 76337854 (-) True G1410571
TU1611740 lncRNA upstream 57397 76365563 ~ 76366016 (-) True G1410573
TU1611751 lncRNA upstream 83413 76391579 ~ 76391896 (-) True G1410584
TU1611752 lncRNA upstream 104246 76412412 ~ 76412685 (-) True G1410585
XM_036947820.1 mRNA downstream 168775 76104209 ~ 76119590 (-) False LOC110492699
XM_036947815.1 mRNA downstream 673243 75600034 ~ 75615122 (-) True LOC110492917
XR_005036630.1 mRNA downstream 673265 75600034 ~ 75615100 (-) False LOC110492917
XM_036945806.1 mRNA downstream 915460 75371620 ~ 75372905 (-) True LOC118939468
XM_021564530.2 mRNA downstream 1241392 75029607 ~ 75046973 (-) True LOC110491183
XM_036947827.1 mRNA upstream 253091 76561257 ~ 76637349 (-) False LOC110492709
XM_036947824.1 mRNA upstream 253091 76561257 ~ 76642094 (-) False LOC110492709
XM_036947825.1 mRNA upstream 253091 76561257 ~ 76642094 (-) False LOC110492709
XM_036947826.1 mRNA upstream 253091 76561257 ~ 76642094 (-) False LOC110492709
XR_005036632.1 mRNA upstream 253091 76561257 ~ 76642094 (-) True LOC110492709
TU1611696 other downstream 10125 76253221 ~ 76278240 (-) False G1410557
TU1611714 other downstream 14340 76254916 ~ 76274025 (-) False G1410557
TU1611711 other downstream 29319 76253221 ~ 76259046 (-) False G1410557
TU1611610 other downstream 122877 76164643 ~ 76165488 (-) True G1410487
TU1611591 other downstream 177267 76104247 ~ 76111098 (-) True LOC110492699
TU1611897 other upstream 248874 76557040 ~ 76558174 (-) False G1410696
TU1611910 other upstream 334614 76642780 ~ 76645664 (-) True G1410701
TU1612017 other upstream 484254 76792420 ~ 76795053 (-) True G1410773
TU1612024 other upstream 487417 76795583 ~ 76795880 (-) False G1410776
TU1612028 other upstream 488200 76796366 ~ 76797111 (-) True G1410776

Expression Profile