RNA id: TU1611752



Basic Information


Item Value
RNA id TU1611752
length 274
lncRNA type intronic
GC content 0.42
exon number 1
gene id G1410585
representative True

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76412412 ~ 76412685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atgtcattgtggggtatcgtgatgtcattgtggggtatcgtgatgtcattgtggggtattgtgatgtcattgtggggtattgtgatgtcattgtggggtattgtgatgtcattgtggggtattgtgatgtcattgtggggtattgtgatgttattgtggggtattgtgatgtcattgtggggtattgtgatgttattgtggggtattgtgatgtcattgtggggtattgtgatgtcattgtggggtattgtgatgttattgtggggtattgtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1611751 lncRNA downstream 20516 76391579 ~ 76391896 (-) True G1410584
TU1611740 lncRNA downstream 46396 76365563 ~ 76366016 (-) True G1410573
TU1611735 lncRNA downstream 74558 76337530 ~ 76337854 (-) True G1410571
TU1611730 lncRNA downstream 88412 76322276 ~ 76324000 (-) True G1410567
TU1611725 lncRNA downstream 104246 76288365 ~ 76308166 (-) True G1410562
TU1611754 lncRNA upstream 1601 76414286 ~ 76418992 (-) False G1410587
TU1611755 lncRNA upstream 1601 76414286 ~ 76418992 (-) True G1410587
TU1611756 lncRNA upstream 6379 76419064 ~ 76419314 (-) True G1410588
TU1611914 lncRNA upstream 130486 76543171 ~ 76544862 (-) True G1410705
TU1611898 lncRNA upstream 144355 76557040 ~ 76557577 (-) True G1410696
XM_036947820.1 mRNA downstream 292822 76104209 ~ 76119590 (-) False LOC110492699
XM_036947815.1 mRNA downstream 797290 75600034 ~ 75615122 (-) True LOC110492917
XR_005036630.1 mRNA downstream 797312 75600034 ~ 75615100 (-) False LOC110492917
XM_036945806.1 mRNA downstream 1039507 75371620 ~ 75372905 (-) True LOC118939468
XM_021564530.2 mRNA downstream 1365439 75029607 ~ 75046973 (-) True LOC110491183
XM_036947827.1 mRNA upstream 148572 76561257 ~ 76637349 (-) False LOC110492709
XM_036947824.1 mRNA upstream 148572 76561257 ~ 76642094 (-) False LOC110492709
XM_036947825.1 mRNA upstream 148572 76561257 ~ 76642094 (-) False LOC110492709
XM_036947826.1 mRNA upstream 148572 76561257 ~ 76642094 (-) False LOC110492709
XR_005036632.1 mRNA upstream 148572 76561257 ~ 76642094 (-) True LOC110492709
TU1611706 other downstream 100465 76290155 ~ 76311947 (-) True G1410557
TU1611716 other downstream 103568 76254916 ~ 76308844 (-) False G1410557
TU1611696 other downstream 134172 76253221 ~ 76278240 (-) False G1410557
TU1611897 other upstream 144355 76557040 ~ 76558174 (-) False G1410696
TU1611910 other upstream 230095 76642780 ~ 76645664 (-) True G1410701
TU1612017 other upstream 379735 76792420 ~ 76795053 (-) True G1410773
TU1612024 other upstream 382898 76795583 ~ 76795880 (-) False G1410776
TU1612028 other upstream 383681 76796366 ~ 76797111 (-) True G1410776

Expression Profile