RNA id: TU1612655



Basic Information


Item Value
RNA id TU1612655
length 231
RNA type TUCP
GC content 0.63
exon number 2
gene id G1411281
representative True

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77165458 ~ 77165823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcaaggagctgccagtctgcaaggagctgtcagtctgcatggagctgccagtctgcaaggagccgccagagctgcctgtctgcaggatgccgccagagctgccagtctgcaaggagccgccagagctgccagtctgcaaggagcagccagagctgccagtcagcatggagcagccagtcagcatggagcagccagagctgccagtcagcatagagcagccagagctgccag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1612599 lncRNA downstream 62702 77102351 ~ 77102756 (-) True LOC110492706
TU1612590 lncRNA downstream 71183 77092803 ~ 77094275 (-) True G1411242
TU1612327 lncRNA downstream 74934 77090266 ~ 77090524 (-) True G1411015
TU1612323 lncRNA downstream 77111 77088145 ~ 77088347 (-) True G1411012
TU1612310 lncRNA downstream 98641 77066601 ~ 77066817 (-) True G1410999
TU1612718 lncRNA upstream 150372 77316195 ~ 77317524 (-) True G1411343
TU1612740 lncRNA upstream 178680 77344503 ~ 77345246 (-) True G1411364
TU1612772 lncRNA upstream 219356 77385179 ~ 77385505 (-) True G1411385
TU1612794 lncRNA upstream 288677 77454500 ~ 77456086 (-) True G1411407
TU1612804 lncRNA upstream 309378 77475201 ~ 77475625 (-) True G1411417
XM_036945807.1 mRNA downstream 20660 77138689 ~ 77144798 (-) True LOC110491186
XM_021567163.2 mRNA downstream 60741 77102080 ~ 77104717 (-) False LOC110492706
XM_036947835.1 mRNA downstream 168438 76807151 ~ 76997020 (-) True LOC118939598
XM_036947831.1 mRNA downstream 390694 76705789 ~ 76774764 (-) True LOC110514470
XM_036947829.1 mRNA downstream 409312 76705789 ~ 76756146 (-) False LOC110514470
XM_036947837.1 mRNA upstream 328037 77493860 ~ 77577462 (-) False ikbkg
XM_036947839.1 mRNA upstream 328037 77493860 ~ 77582329 (-) False ikbkg
XM_036947838.1 mRNA upstream 328038 77493861 ~ 77582658 (-) True ikbkg
XM_036947852.1 mRNA upstream 789776 77955599 ~ 78024975 (-) False flna
XM_036947847.1 mRNA upstream 789776 77955599 ~ 78024977 (-) False flna
TU1612210 other downstream 193339 76961470 ~ 76972119 (-) True G1410911
TU1612028 other downstream 368347 76796366 ~ 76797111 (-) True G1410776
TU1612024 other downstream 369578 76795583 ~ 76795880 (-) False G1410776
TU1612017 other downstream 370405 76792420 ~ 76795053 (-) True G1410773
TU1611910 other downstream 519794 76642780 ~ 76645664 (-) True G1410701
TU1612750 other upstream 183730 77349553 ~ 77351225 (-) True G1411366
TU1613409 other upstream 884443 78050266 ~ 78053138 (-) True G1411862
TU1613387 other upstream 891144 78056967 ~ 78067510 (-) False G1411845
TU1613384 other upstream 900214 78066037 ~ 78067510 (-) False G1411845
TU1613385 other upstream 900214 78066037 ~ 78067510 (-) False G1411845

Expression Profile