RNA id: TU1613701


Basic Information

Item Value
RNA id TU1613701
length 214
lncRNA type intronic
GC content 0.36
exon number 2
gene id G1412089
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78508042 ~ 78508378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CACAGGAAGAGTATGGAGAAGGatatttagttgttgttgttattgtttttatttctgCCGGACATCCACAGGAAGAGTATGGAGAaggatatgttgttgttgttattgtttttatttctgCAGGACATCCACAGGAAGAGTATGGAGAAGGatatttttttgttgttgttgttattgtttttatttctgCAGAACATCCACAGGAAGTGTATGG

Function

GO: NA

KEGG:

id description

JBrowse2

Loading

Neighbor

RNA id RNA type direction distance location representative gene id
TU1613686 lncRNA upstream 16893 78490791 ~ 78491149 (+) True G1412074
TU1613668 lncRNA upstream 26701 78481122 ~ 78481341 (+) True G1412068
TU1613660 lncRNA upstream 49782 78457975 ~ 78458260 (+) True G1412063
TU1613659 lncRNA upstream 50166 78457476 ~ 78457876 (+) True G1412062
TU1613650 lncRNA upstream 74235 78433497 ~ 78433807 (+) True G1412053
TU1613861 lncRNA downstream 8712 78517090 ~ 78517330 (+) True G1412213
XM_036947861.1 mRNA upstream 340899 78148707 ~ 78167143 (+) True hsd17b10
XM_036947858.1 mRNA upstream 440625 78059245 ~ 78067417 (+) False LOC110532872
TU1613581 other upstream 94496 78404191 ~ 78413546 (+) False G1411988
TU1613156 other upstream 384080 78123310 ~ 78123962 (+) True G1411664
TU1612493 other upstream 1013701 77492694 ~ 77494341 (+) False G1411161

Expression Profile

TU1613701 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1000.
End of interactive chart.

TU1613701 Expression in each Bioproject

Bar chart with 8 bars.
TU1613701 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
End of interactive chart.