Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021567709.2 |
| length | 4496 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | LOC110493441 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 21411626 ~ 21417430 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K09270 | SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1634879 | lncRNA | downstream | 11576 | 21399687 ~ 21400050 (-) | False | G1427871 |
| TU1634880 | lncRNA | downstream | 11576 | 21399710 ~ 21400050 (-) | True | G1427871 |
| TU1634882 | lncRNA | downstream | 12399 | 21398487 ~ 21399227 (-) | False | G1427872 |
| TU1634881 | lncRNA | downstream | 12399 | 21398825 ~ 21399227 (-) | True | G1427872 |
| TU1634811 | lncRNA | downstream | 50571 | 21360552 ~ 21361055 (-) | True | G1427809 |
| TU1634889 | lncRNA | upstream | 5235 | 21422665 ~ 21423590 (-) | True | G1427879 |
| TU1634890 | lncRNA | upstream | 6182 | 21423612 ~ 21424091 (-) | True | G1427880 |
| TU1634893 | lncRNA | upstream | 10941 | 21428371 ~ 21429168 (-) | True | G1427883 |
| TU1634899 | lncRNA | upstream | 27113 | 21444543 ~ 21444831 (-) | True | G1427889 |
| TU1634904 | lncRNA | upstream | 33544 | 21450974 ~ 21451202 (-) | True | G1427894 |
| XR_002469146.2 | mRNA | downstream | 2379 | 21407072 ~ 21409247 (-) | False | LOC110493443 |
| XM_021567714.2 | mRNA | downstream | 25978 | 21377786 ~ 21385648 (-) | True | LOC110493446 |
| XM_021567715.2 | mRNA | downstream | 26085 | 21377786 ~ 21385541 (-) | False | LOC110493446 |
| NM_001165247.1 | mRNA | downstream | 44248 | 21364150 ~ 21367378 (-) | True | ntan1 |
| XM_036949364.1 | mRNA | downstream | 51343 | 21353194 ~ 21360283 (-) | True | LOC110493447 |
| XM_021567707.2 | mRNA | upstream | 11918 | 21429348 ~ 21439487 (-) | True | LOC110493440 |
| XR_002469147.2 | mRNA | upstream | 45570 | 21463000 ~ 21465098 (-) | False | LOC110493454 |
| NM_001171862.1 | mRNA | upstream | 73804 | 21491234 ~ 21494421 (-) | True | mb |
| XM_036949375.1 | mRNA | upstream | 368736 | 21786166 ~ 21790195 (-) | True | LOC110493463 |
| trnaa-ugc-129 | mRNA | upstream | 413460 | 21830890 ~ 21830965 (-) | True | trnaa-ugc-129 |
| TU1634843 | other | downstream | 2428 | 21407082 ~ 21409198 (-) | True | LOC110493443 |
| TU1634667 | other | downstream | 400306 | 21007541 ~ 21011320 (-) | False | G1427703 |
| TU1634522 | other | downstream | 624041 | 20785995 ~ 20787585 (-) | True | LOC110511666 |
| TU1634550 | other | downstream | 637251 | 20772526 ~ 20774375 (-) | True | G1427608 |
| TU1634354 | other | downstream | 854734 | 20553196 ~ 20556892 (-) | False | G1427470 |
| TU1635205 | other | upstream | 209247 | 21626677 ~ 21627280 (-) | True | G1428161 |
| TU1635348 | other | upstream | 386901 | 21804331 ~ 21804660 (-) | True | G1428291 |
| TU1635889 | other | upstream | 921949 | 22339379 ~ 22340563 (-) | True | G1428740 |
| TU1636887 | other | upstream | 1836892 | 23254322 ~ 23254592 (-) | True | G1429642 |
| TU1636888 | other | upstream | 1837463 | 23254893 ~ 23255180 (-) | True | G1429643 |
