RNA id: TCONS_00046151



Basic Information


Item Value
RNA id TCONS_00046151
length 120
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_023331
representative True

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 11411822 ~ 11411941 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TGTGCCGGTCTAACTAGCTCTcttcaactctcacatggtcgctcgCTGAAGCCAAGCAGGGTTGCGCCCGGTCAGTGcttagatgggagaccacataggaaagcttTGTTGCTggcggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119690

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00046143 lncRNA downstream 360482 11048860 ~ 11051340 (-) True XLOC_023322
TCONS_00046847 lncRNA downstream 911920 10497369 ~ 10499902 (-) True XLOC_023320
TCONS_00047159 lncRNA downstream 1136164 10269856 ~ 10275658 (-) True XLOC_023318
TCONS_00046846 lncRNA downstream 1415344 9995132 ~ 9996478 (-) True XLOC_023313
TCONS_00047158 lncRNA downstream 1428023 9982279 ~ 9983799 (-) False XLOC_023312
TCONS_00046848 lncRNA upstream 462396 11874337 ~ 11875212 (-) False XLOC_023335
TCONS_00047160 lncRNA upstream 462409 11874350 ~ 11874811 (-) True XLOC_023335
TCONS_00046160 lncRNA upstream 716564 12128505 ~ 12129456 (-) True XLOC_023337
TCONS_00047161 lncRNA upstream 1184597 12596538 ~ 12601729 (-) True XLOC_023339
TCONS_00047162 lncRNA upstream 1329995 12741936 ~ 12744908 (-) False XLOC_023341
TCONS_00046147 mRNA downstream 85973 11112113 ~ 11325849 (-) False XLOC_023329
TCONS_00046149 mRNA downstream 102345 11150776 ~ 11309477 (-) True XLOC_023329
TCONS_00046148 mRNA downstream 284329 11124533 ~ 11127493 (-) False XLOC_023329
TCONS_00046146 mRNA downstream 335422 11070110 ~ 11076400 (-) True XLOC_023328
TCONS_00046145 mRNA downstream 342585 11058151 ~ 11069237 (-) True XLOC_023327
TCONS_00046152 mRNA upstream 19817 11431758 ~ 11446156 (-) True XLOC_023330
TCONS_00046153 mRNA upstream 39136 11451077 ~ 11467549 (-) False XLOC_023332
TCONS_00046154 mRNA upstream 41695 11453636 ~ 11467004 (-) True XLOC_023332
TCONS_00046155 mRNA upstream 57870 11469811 ~ 11506064 (-) False XLOC_023333
TCONS_00046156 mRNA upstream 61622 11473563 ~ 11506054 (-) True XLOC_023333
TCONS_00046142 other downstream 363262 11048446 ~ 11048560 (-) True XLOC_023326
TCONS_00046141 other downstream 400271 11011436 ~ 11011551 (-) True XLOC_023325
TCONS_00046140 other downstream 463677 10948064 ~ 10948145 (-) True XLOC_023324
TCONS_00046137 other downstream 506536 10905172 ~ 10905286 (-) True XLOC_023323
TCONS_00046123 other downstream 1034821 10349147 ~ 10377001 (-) False XLOC_023319
TCONS_00046161 other upstream 743166 12155107 ~ 12156644 (-) True XLOC_023338
TCONS_00046184 other upstream 2197657 13609598 ~ 13609714 (-) True XLOC_023354
TCONS_00046187 other upstream 3121901 14533842 ~ 14536411 (-) True XLOC_023357
TCONS_00046200 other upstream 3801930 15213871 ~ 15213985 (-) True XLOC_023362
TCONS_00046203 other upstream 4662148 16074089 ~ 16075115 (-) True XLOC_023365