Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1641343 |
| length | 1198 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | sept9b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 26844294 ~ 26928896 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
26,926,400
26,926,800
26,927,200
26,927,600
26,928,000
26,928,400
26,928,800
26,929,200
26,929,600
26,930,000
26,930,400
26,930,800
26,931,200
26,931,600
26,932,000
26,932,400
NC_048581.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1641285 | lncRNA | upstream | 127626 | 26793723 ~ 26799993 (+) | True | LOC110493561 |
| TU1641237 | lncRNA | upstream | 254634 | 26672772 ~ 26672985 (+) | True | G1433611 |
| TU1641234 | lncRNA | upstream | 255349 | 26670675 ~ 26672270 (+) | True | G1433609 |
| TU1641165 | lncRNA | upstream | 284932 | 26642374 ~ 26642687 (+) | True | G1433548 |
| TU1640566 | lncRNA | upstream | 325419 | 26601874 ~ 26602200 (+) | True | G1433070 |
| TU1641429 | lncRNA | downstream | 39553 | 26968391 ~ 26980759 (+) | True | G1433756 |
| TU1641453 | lncRNA | downstream | 74500 | 27003338 ~ 27066851 (+) | True | G1433780 |
| TU1641508 | lncRNA | downstream | 177861 | 27106699 ~ 27108740 (+) | True | G1433835 |
| TU1641511 | lncRNA | downstream | 181903 | 27110741 ~ 27113553 (+) | True | G1433838 |
| TU1641520 | lncRNA | downstream | 226746 | 27155584 ~ 27159240 (+) | True | G1433846 |
| XM_036949492.1 | mRNA | upstream | 115 | 26870017 ~ 26927504 (+) | False | sept9b |
| XM_021567909.2 | mRNA | upstream | 111917 | 26812439 ~ 26815702 (+) | True | LOC110493562 |
| XR_005036894.1 | mRNA | upstream | 127609 | 26758441 ~ 26800010 (+) | False | LOC110493561 |
| XR_002469383.2 | mRNA | downstream | 530 | 26929368 ~ 26949045 (+) | False | LOC110495152 |
| XM_036949495.1 | mRNA | downstream | 532 | 26929370 ~ 26949045 (+) | False | LOC110495152 |
| XM_036949494.1 | mRNA | downstream | 533 | 26929371 ~ 26949045 (+) | True | LOC110495152 |
| XM_036949497.1 | mRNA | downstream | 125613 | 27054451 ~ 27143571 (+) | False | tnrc6c2 |
| XM_036949496.1 | mRNA | downstream | 125613 | 27054451 ~ 27149300 (+) | False | tnrc6c2 |
| TU1641244 | other | upstream | 241978 | 26683325 ~ 26685641 (+) | False | LOC110493559 |
| TU1641243 | other | upstream | 241978 | 26683375 ~ 26685641 (+) | True | LOC110493559 |
| TU1640082 | other | upstream | 1104356 | 25762966 ~ 25823263 (+) | True | G1432630 |
| TU1637188 | other | upstream | 3062221 | 23863025 ~ 23865398 (+) | True | LOC110493519 |
| TU1637051 | other | upstream | 3479889 | 23447060 ~ 23447730 (+) | True | G1429776 |
| TU1641606 | other | downstream | 391139 | 27319977 ~ 27333173 (+) | False | LOC110493575 |
| TU1642233 | other | downstream | 608357 | 27537195 ~ 27537570 (+) | True | LOC118940374 |
| TU1642237 | other | downstream | 614349 | 27543187 ~ 27543578 (+) | False | LOC110493581 |
| TU1642246 | other | downstream | 624878 | 27553716 ~ 27554209 (+) | False | LOC118940376 |
| TU1642257 | other | downstream | 669659 | 27598497 ~ 27598792 (+) | True | LOC110493582 |
