Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002469167.2 |
| length | 5416 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | LOC110493575 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 27313574 ~ 27333248 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
27,304,000
27,306,000
27,308,000
27,310,000
27,312,000
27,314,000
27,316,000
27,318,000
27,320,000
27,322,000
27,324,000
27,326,000
27,328,000
27,330,000
27,332,000
27,334,000
27,336,000
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1641585 | lncRNA | upstream | 27274 | 27290372 ~ 27292130 (+) | True | G1433904 |
| TU1641587 | lncRNA | upstream | 32056 | 27264983 ~ 27287348 (+) | True | G1433906 |
| TU1641583 | lncRNA | upstream | 57547 | 27261299 ~ 27261857 (+) | True | G1433902 |
| TU1641581 | lncRNA | upstream | 61012 | 27254885 ~ 27258392 (+) | True | G1433900 |
| TU1641529 | lncRNA | upstream | 88000 | 27175512 ~ 27231404 (+) | True | G1433855 |
| TU1641633 | lncRNA | downstream | 46457 | 27379705 ~ 27380286 (+) | True | G1433945 |
| TU1641651 | lncRNA | downstream | 65405 | 27398653 ~ 27460368 (+) | True | G1433955 |
| TU1641688 | lncRNA | downstream | 112993 | 27446241 ~ 27451970 (+) | True | G1433988 |
| TU1642216 | lncRNA | downstream | 156512 | 27489760 ~ 27490153 (+) | True | G1434451 |
| TU1642222 | lncRNA | downstream | 162819 | 27496067 ~ 27504039 (+) | True | G1434457 |
| XM_021567927.2 | mRNA | upstream | 11392 | 27295869 ~ 27308012 (+) | True | utp6 |
| XM_021567926.2 | mRNA | upstream | 43196 | 27272982 ~ 27276208 (+) | True | tefm |
| XM_036949496.1 | mRNA | upstream | 170104 | 27054451 ~ 27149300 (+) | False | tnrc6c2 |
| XR_005036905.1 | mRNA | downstream | 91204 | 27424452 ~ 27426672 (+) | True | LOC118940369 |
| XM_036949516.1 | mRNA | downstream | 160372 | 27493620 ~ 27496323 (+) | False | LOC110515386 |
| XM_036949517.1 | mRNA | downstream | 160378 | 27493626 ~ 27496323 (+) | True | LOC110515386 |
| XM_036949513.1 | mRNA | downstream | 163186 | 27496434 ~ 27505085 (+) | False | LOC118940370 |
| XM_036949514.1 | mRNA | downstream | 163186 | 27496434 ~ 27505085 (+) | False | LOC118940370 |
| TU1641244 | other | upstream | 633763 | 26683325 ~ 26685641 (+) | False | LOC110493559 |
| TU1641243 | other | upstream | 633763 | 26683375 ~ 26685641 (+) | True | LOC110493559 |
| TU1640082 | other | upstream | 1496141 | 25762966 ~ 25823263 (+) | True | G1432630 |
| TU1637188 | other | upstream | 3454006 | 23863025 ~ 23865398 (+) | True | LOC110493519 |
| TU1637051 | other | upstream | 3871674 | 23447060 ~ 23447730 (+) | True | G1429776 |
| TU1642233 | other | downstream | 203947 | 27537195 ~ 27537570 (+) | True | LOC118940374 |
| TU1642237 | other | downstream | 209939 | 27543187 ~ 27543578 (+) | False | LOC110493581 |
| TU1642246 | other | downstream | 220468 | 27553716 ~ 27554209 (+) | False | LOC118940376 |
| TU1642257 | other | downstream | 265249 | 27598497 ~ 27598792 (+) | True | LOC110493582 |
| TU1642325 | other | downstream | 385209 | 27718457 ~ 27718847 (+) | True | G1434530 |
