Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1642233 |
| length | 376 |
| RNA type | TUCP |
| GC content | 0.57 |
| exon number | 1 |
| gene id | LOC118940374 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 27534233 ~ 27540054 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
27,536,000
27,536,400
27,536,800
27,537,200
27,537,600
27,538,000
27,538,400
27,538,800
27,539,200
27,539,600
27,540,000
27,540,400
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1642232 | lncRNA | upstream | 2922 | 27533666 ~ 27534273 (+) | True | G1434466 |
| TU1642228 | lncRNA | upstream | 25796 | 27511175 ~ 27511399 (+) | True | LOC118940372 |
| TU1642222 | lncRNA | upstream | 33156 | 27496067 ~ 27504039 (+) | True | G1434457 |
| TU1642216 | lncRNA | upstream | 47042 | 27489760 ~ 27490153 (+) | True | G1434451 |
| TU1641651 | lncRNA | upstream | 76827 | 27398653 ~ 27460368 (+) | True | G1433955 |
| TU1642238 | lncRNA | downstream | 6252 | 27543822 ~ 27544078 (+) | False | LOC110493581 |
| TU1642242 | lncRNA | downstream | 9857 | 27547427 ~ 27547644 (+) | True | LOC110493581 |
| TU1642243 | lncRNA | downstream | 12203 | 27549773 ~ 27550015 (+) | False | LOC118940376 |
| TU1642244 | lncRNA | downstream | 13423 | 27550993 ~ 27551327 (+) | False | LOC118940376 |
| TU1642249 | lncRNA | downstream | 17135 | 27554705 ~ 27555402 (+) | True | LOC118940376 |
| XM_036949527.1 | mRNA | upstream | 2972 | 27527075 ~ 27534223 (+) | False | LOC118940375 |
| XM_036949528.1 | mRNA | upstream | 2972 | 27527075 ~ 27534223 (+) | True | LOC118940375 |
| XM_036949523.1 | mRNA | upstream | 11218 | 27523481 ~ 27525977 (+) | True | LOC118940373 |
| XM_036949518.1 | mRNA | upstream | 18032 | 27513342 ~ 27519163 (+) | False | LOC118940371 |
| XM_036949519.1 | mRNA | upstream | 18032 | 27513342 ~ 27519163 (+) | False | LOC118940371 |
| XM_036948359.1 | mRNA | downstream | 5701 | 27543271 ~ 27547668 (+) | False | LOC110493581 |
| XM_036949529.1 | mRNA | downstream | 11957 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036949530.1 | mRNA | downstream | 11957 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036949531.1 | mRNA | downstream | 11957 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XR_005036911.1 | mRNA | downstream | 19773 | 27557343 ~ 27559064 (+) | True | LOC118940378 |
| TU1641606 | other | upstream | 204022 | 27319977 ~ 27333173 (+) | False | LOC110493575 |
| TU1641244 | other | upstream | 851554 | 26683325 ~ 26685641 (+) | False | LOC110493559 |
| TU1641243 | other | upstream | 851554 | 26683375 ~ 26685641 (+) | True | LOC110493559 |
| TU1640082 | other | upstream | 1713932 | 25762966 ~ 25823263 (+) | True | G1432630 |
| TU1637188 | other | upstream | 3671797 | 23863025 ~ 23865398 (+) | True | LOC110493519 |
| TU1642237 | other | downstream | 5617 | 27543187 ~ 27543578 (+) | False | LOC110493581 |
| TU1642246 | other | downstream | 16146 | 27553716 ~ 27554209 (+) | False | LOC118940376 |
| TU1642257 | other | downstream | 60927 | 27598497 ~ 27598792 (+) | True | LOC110493582 |
| TU1642325 | other | downstream | 180887 | 27718457 ~ 27718847 (+) | True | G1434530 |
| TU1642785 | other | downstream | 659126 | 28196696 ~ 28197581 (+) | True | G1434906 |
