Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036949532.1 |
| length | 3381 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | LOC118940377 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 27559072 ~ 27563359 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
27,555,000
27,556,000
27,557,000
27,558,000
27,559,000
27,560,000
27,561,000
27,562,000
27,563,000
27,564,000
27,565,000
27,566,000
27,567,000
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1642249 | lncRNA | upstream | 3670 | 27554705 ~ 27555402 (+) | True | LOC118940376 |
| TU1642244 | lncRNA | upstream | 7745 | 27550993 ~ 27551327 (+) | False | LOC118940376 |
| TU1642243 | lncRNA | upstream | 9057 | 27549773 ~ 27550015 (+) | False | LOC118940376 |
| TU1642242 | lncRNA | upstream | 11428 | 27547427 ~ 27547644 (+) | True | LOC110493581 |
| TU1642238 | lncRNA | upstream | 14994 | 27543822 ~ 27544078 (+) | False | LOC110493581 |
| TU1642255 | lncRNA | downstream | 19211 | 27582570 ~ 27582807 (+) | True | LOC118940380 |
| TU1642256 | lncRNA | downstream | 30541 | 27593900 ~ 27594181 (+) | True | LOC118940115 |
| TU1642259 | lncRNA | downstream | 35460 | 27598819 ~ 27606732 (+) | True | G1434489 |
| TU1642287 | lncRNA | downstream | 61757 | 27625116 ~ 27633062 (+) | True | G1434499 |
| TU1642312 | lncRNA | downstream | 140998 | 27704357 ~ 27710413 (+) | True | G1434517 |
| XR_005036911.1 | mRNA | upstream | 8 | 27557343 ~ 27559064 (+) | True | LOC118940378 |
| XM_036949529.1 | mRNA | upstream | 3645 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036949530.1 | mRNA | upstream | 3645 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036949531.1 | mRNA | upstream | 3645 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036948359.1 | mRNA | upstream | 11404 | 27543271 ~ 27547668 (+) | False | LOC110493581 |
| XM_036949534.1 | mRNA | downstream | 1671 | 27565030 ~ 27570925 (+) | False | LOC118940379 |
| XM_036949535.1 | mRNA | downstream | 1671 | 27565030 ~ 27570925 (+) | False | LOC118940379 |
| XM_036949536.1 | mRNA | downstream | 1671 | 27565030 ~ 27570925 (+) | True | LOC118940379 |
| XM_036948360.1 | mRNA | downstream | 9794 | 27573153 ~ 27578432 (+) | True | LOC118940114 |
| XM_036949537.1 | mRNA | downstream | 18810 | 27582169 ~ 27586415 (+) | False | LOC118940380 |
| TU1642246 | other | upstream | 4863 | 27553716 ~ 27554209 (+) | False | LOC118940376 |
| TU1642237 | other | upstream | 15494 | 27543187 ~ 27543578 (+) | False | LOC110493581 |
| TU1642233 | other | upstream | 21502 | 27537195 ~ 27537570 (+) | True | LOC118940374 |
| TU1641606 | other | upstream | 225899 | 27319977 ~ 27333173 (+) | False | LOC110493575 |
| TU1641243 | other | upstream | 873431 | 26683375 ~ 26685641 (+) | True | LOC110493559 |
| TU1642257 | other | downstream | 35138 | 27598497 ~ 27598792 (+) | True | LOC110493582 |
| TU1642325 | other | downstream | 155098 | 27718457 ~ 27718847 (+) | True | G1434530 |
| TU1642785 | other | downstream | 633337 | 28196696 ~ 28197581 (+) | True | G1434906 |
| TU1643535 | other | downstream | 1100995 | 28664354 ~ 28664979 (+) | True | G1435540 |
| TU1643486 | other | downstream | 1240458 | 28803817 ~ 28807899 (+) | True | LOC110495133 |
