Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046182 |
| length | 1932 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | XLOC_023353 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 13361846 ~ 13566015 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0051260 | protein homooligomerization | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0006813 | potassium ion transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008076 | voltage-gated potassium channel complex | cellular_component |
| GO:0005216 | ion channel activity | molecular_function |
| GO:0005244 | voltage-gated ion channel activity | molecular_function |
| GO:0005249 | voltage-gated potassium channel activity | molecular_function |
| GO:0005251 | delayed rectifier potassium channel activity | molecular_function |
| GO:0005267 | potassium channel activity | molecular_function |
| id | description |
|---|---|
| ko04040 | Ion channels |
| id | description |
|---|---|
| ZDB-GENE-070912-170 | Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within several processes, including potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in dendrite; membrane; and perikaryon. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Orthologous to human KCNB2 (potassium voltage-gated channel subfamily B member 2). |
| ensembl_id | ENSDART00000183808 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00047166 | lncRNA | downstream | 4194 | 13355278 ~ 13357652 (-) | True | XLOC_023352 |
| TCONS_00046181 | lncRNA | downstream | 14329 | 13341064 ~ 13347517 (-) | True | XLOC_023351 |
| TCONS_00046176 | lncRNA | downstream | 106814 | 13252312 ~ 13255032 (-) | False | XLOC_023350 |
| TCONS_00047165 | lncRNA | downstream | 115961 | 13224248 ~ 13245885 (-) | True | XLOC_023349 |
| TCONS_00047164 | lncRNA | downstream | 236373 | 13058667 ~ 13125473 (-) | True | XLOC_023348 |
| TCONS_00047167 | lncRNA | upstream | 1077643 | 14441954 ~ 14445136 (-) | True | XLOC_023356 |
| TCONS_00047168 | lncRNA | upstream | 1641201 | 15005512 ~ 15032354 (-) | True | XLOC_023360 |
| TCONS_00046849 | lncRNA | upstream | 2380759 | 15745070 ~ 15749414 (-) | True | XLOC_023364 |
| TCONS_00047169 | lncRNA | upstream | 2782192 | 16146503 ~ 16147518 (-) | True | XLOC_023366 |
| TCONS_00046850 | lncRNA | upstream | 2840477 | 16204788 ~ 16222786 (-) | True | XLOC_023367 |
| TCONS_00046178 | mRNA | downstream | 12044 | 13336327 ~ 13349802 (-) | False | XLOC_023351 |
| TCONS_00046180 | mRNA | downstream | 12374 | 13338123 ~ 13349472 (-) | False | XLOC_023351 |
| TCONS_00046179 | mRNA | downstream | 12382 | 13337213 ~ 13349464 (-) | False | XLOC_023351 |
| TCONS_00046175 | mRNA | downstream | 89003 | 13251480 ~ 13272843 (-) | False | XLOC_023350 |
| TCONS_00046177 | mRNA | downstream | 89004 | 13255409 ~ 13272842 (-) | True | XLOC_023350 |
| TCONS_00046185 | mRNA | upstream | 838016 | 14202327 ~ 14212521 (-) | False | XLOC_023355 |
| TCONS_00046186 | mRNA | upstream | 838019 | 14202330 ~ 14209202 (-) | True | XLOC_023355 |
| TCONS_00046188 | mRNA | upstream | 1195017 | 14559328 ~ 14577544 (-) | False | XLOC_023358 |
| TCONS_00046189 | mRNA | upstream | 1195031 | 14559342 ~ 14577559 (-) | False | XLOC_023358 |
| TCONS_00046190 | mRNA | upstream | 1195571 | 14559882 ~ 14576812 (-) | False | XLOC_023358 |
| TCONS_00046161 | other | downstream | 1205202 | 12155107 ~ 12156644 (-) | True | XLOC_023338 |
| TCONS_00046151 | other | downstream | 1949905 | 11411822 ~ 11411941 (-) | True | XLOC_023331 |
| TCONS_00046142 | other | downstream | 2313286 | 11048446 ~ 11048560 (-) | True | XLOC_023326 |
| TCONS_00046141 | other | downstream | 2350295 | 11011436 ~ 11011551 (-) | True | XLOC_023325 |
| TCONS_00046140 | other | downstream | 2413701 | 10948064 ~ 10948145 (-) | True | XLOC_023324 |
| TCONS_00046184 | other | upstream | 245287 | 13609598 ~ 13609714 (-) | True | XLOC_023354 |
| TCONS_00046187 | other | upstream | 1169531 | 14533842 ~ 14536411 (-) | True | XLOC_023357 |
| TCONS_00046200 | other | upstream | 1849560 | 15213871 ~ 15213985 (-) | True | XLOC_023362 |
| TCONS_00046203 | other | upstream | 2709778 | 16074089 ~ 16075115 (-) | True | XLOC_023365 |
| TCONS_00046204 | other | upstream | 3190558 | 16554869 ~ 16554983 (-) | True | XLOC_023368 |
