RNA id: trnaa-ugc-132



Basic Information


Item Value
RNA id trnaa-ugc-132
length 81
RNA type mRNA
GC content 0.56
exon number 1
gene id trnaa-ugc-132
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 31645752 ~ 31645832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tcccgtgtagctcagttggtagagcatggtgcttgcaacgccagggttgtgggttcgattcccacggtggaccagtatgaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1647177 lncRNA upstream 19294 31626230 ~ 31626458 (+) False LOC110493162
TU1647173 lncRNA upstream 34741 31610796 ~ 31611011 (+) True G1438854
TU1647171 lncRNA upstream 35898 31609564 ~ 31609854 (+) True G1438852
TU1647132 lncRNA upstream 46299 31599093 ~ 31599453 (+) True G1438820
TU1647131 lncRNA upstream 46945 31598542 ~ 31598807 (+) True G1438819
TU1647176 lncRNA downstream 45360 31691192 ~ 31692182 (+) True LOC110493162
TU1647212 lncRNA downstream 64100 31709932 ~ 31711208 (+) True G1438886
TU1647189 lncRNA downstream 111032 31756864 ~ 31758155 (+) True LOC110493723
TU1647281 lncRNA downstream 162644 31808476 ~ 31808752 (+) True G1438952
TU1647283 lncRNA downstream 164354 31810186 ~ 31810424 (+) True G1438954
XM_021568137.2 mRNA upstream 20923 31611439 ~ 31624829 (+) True LOC110493719
XR_005037257.1 mRNA upstream 21448 31624170 ~ 31624304 (+) True LOC118940671
XR_005037256.1 mRNA upstream 22886 31622730 ~ 31622866 (+) True LOC118940670
XR_005037261.1 mRNA upstream 26698 31618922 ~ 31619054 (+) True LOC118940675
XM_036948369.1 mRNA upstream 37250 31594262 ~ 31608502 (+) True LOC110493718
XR_005037253.1 mRNA downstream 3380 31649212 ~ 31649342 (+) True LOC118940667
XR_005037263.1 mRNA downstream 24389 31670221 ~ 31670354 (+) True LOC118940677
XM_021568141.2 mRNA downstream 77203 31723035 ~ 31743199 (+) True LOC110493722
XM_021568142.2 mRNA downstream 98699 31744531 ~ 31757309 (+) False LOC110493723
XM_021568143.2 mRNA downstream 112698 31758530 ~ 31769160 (+) False LOC110493724
TU1646135 other upstream 712168 30927247 ~ 30933584 (+) False G1437911
TU1646137 other upstream 712168 30927247 ~ 30933584 (+) True G1437911
TU1645937 other upstream 979745 30665171 ~ 30666007 (+) True G1437734
TU1645348 other upstream 1230818 30410743 ~ 30414934 (+) True G1437183
TU1645335 other upstream 1250102 30390701 ~ 30395650 (+) True LOC110493688
TU1647204 other downstream 56662 31702494 ~ 31705164 (+) True G1438880
TU1647270 other downstream 260690 31906522 ~ 31907498 (+) True G1438941
TU1647620 other downstream 327608 31973440 ~ 31976221 (+) True LOC110493164
TU1647841 other downstream 727783 32373615 ~ 32378308 (+) True ero1b
TU1648185 other downstream 954404 32600236 ~ 32610341 (+) True rbm34

Expression Profile