RNA id: TCONS_00046204



Basic Information


Item Value
RNA id TCONS_00046204
length 115
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_023368
representative True

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 16554869 ~ 16554983 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


gctggcagctagctctctgcaactctcacatggtcgcccattgAAGCTTAttagggctgcgcctggtcagtacctgaatgggagaccacatggaagaACTAGGTTGCCGCAAGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000191209

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00046850 lncRNA downstream 332083 16204788 ~ 16222786 (-) True XLOC_023367
TCONS_00047169 lncRNA downstream 407351 16146503 ~ 16147518 (-) True XLOC_023366
TCONS_00046849 lncRNA downstream 805455 15745070 ~ 15749414 (-) True XLOC_023364
TCONS_00047168 lncRNA downstream 1522515 15005512 ~ 15032354 (-) True XLOC_023360
TCONS_00047167 lncRNA downstream 2109733 14441954 ~ 14445136 (-) True XLOC_023356
TCONS_00047170 lncRNA upstream 569427 17124410 ~ 17126986 (-) True XLOC_023376
TCONS_00047171 lncRNA upstream 678543 17233526 ~ 17236200 (-) True XLOC_023378
TCONS_00046227 lncRNA upstream 811326 17366309 ~ 17368570 (-) True XLOC_023379
TCONS_00047172 lncRNA upstream 848487 17403470 ~ 17406396 (-) False XLOC_023380
TCONS_00046228 lncRNA upstream 848487 17403470 ~ 17406483 (-) True XLOC_023380
TCONS_00046201 mRNA downstream 905991 15642577 ~ 15648878 (-) False XLOC_023363
TCONS_00046202 mRNA downstream 906233 15645468 ~ 15648636 (-) True XLOC_023363
TCONS_00046197 mRNA downstream 1291727 15130979 ~ 15263142 (-) False XLOC_023361
TCONS_00046205 mRNA upstream 296230 16851213 ~ 16904234 (-) False XLOC_023369
TCONS_00046206 mRNA upstream 296230 16851213 ~ 16904803 (-) False XLOC_023369
TCONS_00046207 mRNA upstream 300747 16855730 ~ 16905018 (-) False XLOC_023369
TCONS_00046208 mRNA upstream 334530 16889513 ~ 16899406 (-) False XLOC_023369
TCONS_00046209 mRNA upstream 341346 16896329 ~ 16904865 (-) False XLOC_023369
TCONS_00046203 other downstream 479754 16074089 ~ 16075115 (-) True XLOC_023365
TCONS_00046200 other downstream 1340884 15213871 ~ 15213985 (-) True XLOC_023362
TCONS_00046187 other downstream 2018458 14533842 ~ 14536411 (-) True XLOC_023357
TCONS_00046184 other downstream 2945155 13609598 ~ 13609714 (-) True XLOC_023354
TCONS_00046161 other downstream 4398225 12155107 ~ 12156644 (-) True XLOC_023338
TCONS_00046210 other upstream 341825 16896808 ~ 16900124 (-) False XLOC_023369
TCONS_00046216 other upstream 416121 16971104 ~ 16979728 (-) True XLOC_023371
TCONS_00046223 other upstream 581766 17136749 ~ 17139114 (-) True XLOC_023377
TCONS_00046236 other upstream 991770 17546753 ~ 17546869 (-) True XLOC_023383
TCONS_00046242 other upstream 1898189 18453172 ~ 18456584 (-) False XLOC_023386