Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1650931 |
| length | 815 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | tmem178 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 34589353 ~ 34605070 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1650985 | lncRNA | downstream | 24649 | 34564264 ~ 34564704 (-) | True | G1442243 |
| TU1650983 | lncRNA | downstream | 26551 | 34562571 ~ 34562802 (-) | True | G1442241 |
| TU1650934 | lncRNA | downstream | 28906 | 34471781 ~ 34560447 (-) | False | G1442194 |
| TU1650933 | lncRNA | downstream | 28906 | 34555096 ~ 34560447 (-) | True | G1442194 |
| TU1650923 | lncRNA | downstream | 123952 | 34460594 ~ 34465401 (-) | True | G1442188 |
| TU1651002 | lncRNA | upstream | 17451 | 34607618 ~ 34607860 (-) | True | G1442260 |
| TU1651026 | lncRNA | upstream | 53657 | 34643824 ~ 34714014 (-) | True | G1442283 |
| TU1651034 | lncRNA | upstream | 63773 | 34653940 ~ 34654599 (-) | True | G1442291 |
| TU1651044 | lncRNA | upstream | 102696 | 34692863 ~ 34695051 (-) | True | G1442300 |
| TU1651085 | lncRNA | upstream | 125152 | 34715319 ~ 34715556 (-) | True | G1442333 |
| LOC118940658 | mRNA | downstream | 92684 | 34496620 ~ 34496669 (-) | True | LOC118940658 |
| XM_021568263.2 | mRNA | downstream | 138520 | 34446356 ~ 34450833 (-) | False | pgap4 |
| XM_021568264.2 | mRNA | downstream | 139123 | 34446356 ~ 34450230 (-) | False | pgap4 |
| XM_021568259.2 | mRNA | downstream | 158797 | 34413543 ~ 34430556 (-) | True | tpcn3 |
| XM_036948372.1 | mRNA | downstream | 191666 | 34348767 ~ 34397687 (-) | False | ttbk1a |
| XM_021568272.2 | mRNA | upstream | 682 | 34590849 ~ 34605067 (-) | False | tmem178 |
| XM_021568273.2 | mRNA | upstream | 682 | 34590849 ~ 34605070 (-) | False | tmem178 |
| XM_021568283.2 | mRNA | upstream | 195370 | 34785537 ~ 34787269 (-) | False | gemin6 |
| XM_021568284.2 | mRNA | upstream | 195370 | 34785537 ~ 34788361 (-) | True | gemin6 |
| XM_036948373.1 | mRNA | upstream | 224186 | 34814353 ~ 34815153 (-) | True | LOC118940117 |
| TU1650874 | other | downstream | 228047 | 34360102 ~ 34361306 (-) | True | G1442139 |
| TU1649593 | other | downstream | 1173000 | 33413124 ~ 33416353 (-) | True | LOC110493763 |
| TU1649328 | other | downstream | 1202825 | 33385937 ~ 33386528 (-) | True | G1440786 |
| TU1649323 | other | downstream | 1206634 | 33381901 ~ 33382719 (-) | True | G1440781 |
| TU1649246 | other | downstream | 1336974 | 33238621 ~ 33252379 (-) | True | G1440711 |
| TU1651088 | other | upstream | 130260 | 34720427 ~ 34720792 (-) | True | G1442336 |
| TU1651205 | other | upstream | 313915 | 34904082 ~ 34904616 (-) | True | G1442443 |
| TU1651483 | other | upstream | 470032 | 35060199 ~ 35061975 (-) | True | LOC110493800 |
| TU1651773 | other | upstream | 638587 | 35228754 ~ 35232154 (-) | True | G1442932 |
| TU1652432 | other | upstream | 1025537 | 35615704 ~ 35617922 (-) | False | LOC110495171 |
