Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1660550 |
| length | 1165 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | LOC110493907 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 42329565 ~ 42407845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1660552 | lncRNA | upstream | 4984 | 42400975 ~ 42401614 (+) | False | LOC110493907 |
| TU1660569 | lncRNA | upstream | 21627 | 42384727 ~ 42384971 (+) | True | G1451195 |
| TU1660567 | lncRNA | upstream | 38879 | 42367474 ~ 42367719 (+) | True | G1451193 |
| TU1660566 | lncRNA | upstream | 39156 | 42367122 ~ 42367442 (+) | True | G1451192 |
| TU1660565 | lncRNA | upstream | 40050 | 42366326 ~ 42366548 (+) | True | G1451191 |
| TU1660551 | lncRNA | downstream | 2968 | 42410730 ~ 42411333 (+) | True | G1451179 |
| TU1660574 | lncRNA | downstream | 6314 | 42414076 ~ 42414286 (+) | True | G1451200 |
| TU1660575 | lncRNA | downstream | 7166 | 42414928 ~ 42415255 (+) | True | G1451201 |
| TU1660584 | lncRNA | downstream | 17871 | 42425633 ~ 42425865 (+) | True | G1451210 |
| TU1660929 | lncRNA | downstream | 134327 | 42542089 ~ 42542319 (+) | True | G1451534 |
| XM_036949898.1 | mRNA | upstream | 4804 | 42329565 ~ 42401794 (+) | False | LOC110493907 |
| XR_002469211.2 | mRNA | upstream | 4804 | 42329565 ~ 42401794 (+) | False | LOC110493907 |
| XM_021568493.2 | mRNA | upstream | 297856 | 42029990 ~ 42108742 (+) | False | LOC110493904 |
| XM_021568494.2 | mRNA | upstream | 297857 | 42029991 ~ 42108741 (+) | True | LOC110493904 |
| XM_036949891.1 | mRNA | upstream | 518917 | 41822362 ~ 41887681 (+) | True | LOC110493901 |
| XM_036949899.1 | mRNA | downstream | 27566 | 42435328 ~ 42516956 (+) | False | LOC110493908 |
| XM_036949900.1 | mRNA | downstream | 27566 | 42435328 ~ 42516956 (+) | False | LOC110493908 |
| XM_036949901.1 | mRNA | downstream | 27566 | 42435328 ~ 42516956 (+) | False | LOC110493908 |
| XM_036949902.1 | mRNA | downstream | 27566 | 42435328 ~ 42516956 (+) | True | LOC110493908 |
| XM_036949903.1 | mRNA | downstream | 120987 | 42528749 ~ 42532546 (+) | False | LOC110493909 |
| TU1659721 | other | upstream | 516083 | 41792883 ~ 41890515 (+) | True | G1450387 |
| TU1659644 | other | upstream | 712880 | 41642123 ~ 41693718 (+) | True | LOC110493897 |
| TU1658524 | other | upstream | 1438532 | 40949542 ~ 40968066 (+) | True | LOC110493893 |
| TU1657230 | other | upstream | 2606362 | 39799936 ~ 39800236 (+) | True | G1447998 |
| TU1656618 | other | upstream | 2979698 | 39343027 ~ 39426900 (+) | True | pmepa1 |
| TU1661375 | other | downstream | 920824 | 43328586 ~ 43459832 (+) | False | G1451948 |
| TU1661383 | other | downstream | 921337 | 43329099 ~ 43409816 (+) | True | G1451956 |
| TU1661373 | other | downstream | 925753 | 43333515 ~ 43428562 (+) | False | G1451948 |
| TU1661374 | other | downstream | 925753 | 43333515 ~ 43436740 (+) | True | G1451948 |
| TU1661834 | other | downstream | 1074498 | 43482260 ~ 43483693 (+) | True | G1452359 |
