Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021568344.2 |
| length | 1008 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC110493836 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43260166 ~ 43270260 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K16338 | SDC4; syndecan 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1661478 | lncRNA | upstream | 7492 | 43250676 ~ 43252674 (+) | True | G1452048 |
| TU1661472 | lncRNA | upstream | 15312 | 43244509 ~ 43244854 (+) | True | G1452043 |
| TU1661467 | lncRNA | upstream | 18795 | 43241049 ~ 43241371 (+) | True | G1452038 |
| TU1661465 | lncRNA | upstream | 20766 | 43239170 ~ 43239400 (+) | True | G1452036 |
| TU1661464 | lncRNA | upstream | 21621 | 43238310 ~ 43238545 (+) | True | G1452035 |
| TU1661385 | lncRNA | downstream | 1053 | 43271313 ~ 43272057 (+) | True | G1451958 |
| TU1661380 | lncRNA | downstream | 1891 | 43272151 ~ 43273171 (+) | True | G1451953 |
| TU1661504 | lncRNA | downstream | 45674 | 43315934 ~ 43317649 (+) | False | G1452073 |
| TU1661505 | lncRNA | downstream | 45674 | 43315934 ~ 43318830 (+) | True | G1452073 |
| TU1661519 | lncRNA | downstream | 50525 | 43320785 ~ 43321022 (+) | True | G1452087 |
| XM_021568523.2 | mRNA | upstream | 307968 | 42950528 ~ 42952198 (+) | True | LOC110493924 |
| XM_021568513.2 | mRNA | upstream | 483871 | 42770305 ~ 42776295 (+) | False | LOC110493915 |
| XM_036949906.1 | mRNA | upstream | 483871 | 42770305 ~ 42776295 (+) | False | LOC110493915 |
| XM_036949905.1 | mRNA | upstream | 483871 | 42770359 ~ 42776295 (+) | True | LOC110493915 |
| XM_021568511.2 | mRNA | upstream | 498057 | 42740378 ~ 42762109 (+) | True | LOC110493912 |
| LOC118940459 | mRNA | downstream | 49537 | 43319797 ~ 43330019 (+) | True | LOC118940459 |
| LOC118940518 | mRNA | downstream | 53268 | 43323528 ~ 43323647 (+) | True | LOC118940518 |
| LOC110493832 | mRNA | downstream | 60169 | 43330429 ~ 43330803 (+) | True | LOC110493832 |
| XM_036948407.1 | mRNA | downstream | 62055 | 43332315 ~ 43332962 (+) | False | LOC118940144 |
| LOC118940451 | mRNA | downstream | 63170 | 43333430 ~ 43334041 (+) | True | LOC118940451 |
| TU1659721 | other | upstream | 1369651 | 41792883 ~ 41890515 (+) | True | G1450387 |
| TU1659644 | other | upstream | 1566448 | 41642123 ~ 41693718 (+) | True | LOC110493897 |
| TU1658524 | other | upstream | 2292100 | 40949542 ~ 40968066 (+) | True | LOC110493893 |
| TU1657230 | other | upstream | 3459930 | 39799936 ~ 39800236 (+) | True | G1447998 |
| TU1656618 | other | upstream | 3833266 | 39343027 ~ 39426900 (+) | True | pmepa1 |
| TU1661375 | other | downstream | 58326 | 43328586 ~ 43459832 (+) | False | G1451948 |
| TU1661383 | other | downstream | 58839 | 43329099 ~ 43409816 (+) | True | G1451956 |
| TU1661373 | other | downstream | 63255 | 43333515 ~ 43428562 (+) | False | G1451948 |
| TU1661374 | other | downstream | 63255 | 43333515 ~ 43436740 (+) | True | G1451948 |
| TU1661834 | other | downstream | 212000 | 43482260 ~ 43483693 (+) | True | G1452359 |
