Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC118940451 |
| length | 612 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | LOC118940451 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43333430 ~ 43334041 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0042742 | defense response to bacterium | biological_process |
| GO:0031640 | killing of cells of other organism | biological_process |
| GO:0050832 | defense response to fungus | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1661522 | lncRNA | upstream | 6498 | 43326718 ~ 43326932 (+) | True | G1452090 |
| TU1661521 | lncRNA | upstream | 6732 | 43326395 ~ 43326698 (+) | True | G1452089 |
| TU1661519 | lncRNA | upstream | 12408 | 43320785 ~ 43321022 (+) | True | G1452087 |
| TU1661505 | lncRNA | upstream | 14600 | 43315934 ~ 43318830 (+) | True | G1452073 |
| TU1661504 | lncRNA | upstream | 15781 | 43315934 ~ 43317649 (+) | False | G1452073 |
| TU1661839 | lncRNA | downstream | 163495 | 43497536 ~ 43497760 (+) | True | G1452364 |
| TU1661842 | lncRNA | downstream | 165853 | 43499894 ~ 43505382 (+) | False | G1452366 |
| TU1661841 | lncRNA | downstream | 170436 | 43504477 ~ 43517376 (+) | True | G1452366 |
| TU1661848 | lncRNA | downstream | 174678 | 43508719 ~ 43552834 (+) | False | G1452369 |
| TU1661859 | lncRNA | downstream | 174678 | 43508719 ~ 43562011 (+) | False | G1452369 |
| XM_036948407.1 | mRNA | upstream | 468 | 43332315 ~ 43332962 (+) | False | LOC118940144 |
| LOC110493832 | mRNA | upstream | 2627 | 43330429 ~ 43330803 (+) | True | LOC110493832 |
| LOC118940459 | mRNA | upstream | 3411 | 43319797 ~ 43330019 (+) | True | LOC118940459 |
| LOC118940518 | mRNA | upstream | 9783 | 43323528 ~ 43323647 (+) | True | LOC118940518 |
| XM_021568344.2 | mRNA | upstream | 63170 | 43260166 ~ 43270260 (+) | True | LOC110493836 |
| XM_036949936.1 | mRNA | downstream | 7355 | 43341396 ~ 43342673 (+) | True | LOC118940452 |
| XM_036949935.1 | mRNA | downstream | 8713 | 43342754 ~ 43343223 (+) | True | LOC118940450 |
| XM_036949940.1 | mRNA | downstream | 13349 | 43347390 ~ 43348641 (+) | True | LOC118940456 |
| XM_036949937.1 | mRNA | downstream | 15022 | 43349063 ~ 43349732 (+) | True | LOC118940453 |
| XM_021568346.2 | mRNA | downstream | 35349 | 43369390 ~ 43395004 (+) | True | LOC110493838 |
| TU1659721 | other | upstream | 1442915 | 41792883 ~ 41890515 (+) | True | G1450387 |
| TU1659644 | other | upstream | 1639712 | 41642123 ~ 41693718 (+) | True | LOC110493897 |
| TU1658524 | other | upstream | 2365364 | 40949542 ~ 40968066 (+) | True | LOC110493893 |
| TU1657230 | other | upstream | 3533194 | 39799936 ~ 39800236 (+) | True | G1447998 |
| TU1656618 | other | upstream | 3906530 | 39343027 ~ 39426900 (+) | True | pmepa1 |
| TU1661834 | other | downstream | 148219 | 43482260 ~ 43483693 (+) | True | G1452359 |
| TU1661837 | other | downstream | 157133 | 43491174 ~ 43492068 (+) | True | G1452362 |
| TU1661856 | other | downstream | 207623 | 43541664 ~ 43563701 (+) | False | G1452369 |
| TU1661935 | other | downstream | 272272 | 43606313 ~ 43606781 (+) | True | G1452399 |
| TU1662359 | other | downstream | 1179028 | 44513069 ~ 44520477 (+) | True | G1452804 |
