Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC118940464 |
| length | 461 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | LOC118940464 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43458743 ~ 43459203 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1661378 | lncRNA | upstream | 117357 | 43332567 ~ 43341386 (+) | True | LOC118940144 |
| TU1661522 | lncRNA | upstream | 131811 | 43326718 ~ 43326932 (+) | True | G1452090 |
| TU1661521 | lncRNA | upstream | 132045 | 43326395 ~ 43326698 (+) | True | G1452089 |
| TU1661519 | lncRNA | upstream | 137721 | 43320785 ~ 43321022 (+) | True | G1452087 |
| TU1661505 | lncRNA | upstream | 139913 | 43315934 ~ 43318830 (+) | True | G1452073 |
| TU1661839 | lncRNA | downstream | 38333 | 43497536 ~ 43497760 (+) | True | G1452364 |
| TU1661842 | lncRNA | downstream | 40691 | 43499894 ~ 43505382 (+) | False | G1452366 |
| TU1661841 | lncRNA | downstream | 45274 | 43504477 ~ 43517376 (+) | True | G1452366 |
| TU1661848 | lncRNA | downstream | 49516 | 43508719 ~ 43552834 (+) | False | G1452369 |
| TU1661859 | lncRNA | downstream | 49516 | 43508719 ~ 43562011 (+) | False | G1452369 |
| XM_036949948.1 | mRNA | upstream | 487 | 43445921 ~ 43458256 (+) | True | LOC118940465 |
| XM_036949943.1 | mRNA | upstream | 6310 | 43450554 ~ 43452433 (+) | True | LOC118940460 |
| XM_036949945.1 | mRNA | upstream | 16707 | 43441506 ~ 43442036 (+) | True | LOC118940462 |
| XM_036949944.1 | mRNA | upstream | 17533 | 43439331 ~ 43441210 (+) | True | LOC118940461 |
| XM_036948410.1 | mRNA | upstream | 17591 | 43440766 ~ 43441152 (+) | True | LOC118940146 |
| XM_021568531.2 | mRNA | downstream | 480714 | 43939917 ~ 44074496 (+) | False | plxnb1b |
| XM_021568537.2 | mRNA | downstream | 623093 | 44082296 ~ 44097283 (+) | False | LOC110493929 |
| XM_036949954.1 | mRNA | downstream | 639753 | 44098956 ~ 44148363 (+) | False | setd5 |
| XM_036949951.1 | mRNA | downstream | 644517 | 44103720 ~ 44148363 (+) | False | setd5 |
| XM_036949950.1 | mRNA | downstream | 644518 | 44103721 ~ 44148363 (+) | False | setd5 |
| TU1661374 | other | upstream | 22003 | 43333515 ~ 43436740 (+) | True | G1451948 |
| TU1661373 | other | upstream | 30181 | 43333515 ~ 43428562 (+) | False | G1451948 |
| TU1661383 | other | upstream | 48927 | 43329099 ~ 43409816 (+) | True | G1451956 |
| TU1659721 | other | upstream | 1568228 | 41792883 ~ 41890515 (+) | True | G1450387 |
| TU1659644 | other | upstream | 1765025 | 41642123 ~ 41693718 (+) | True | LOC110493897 |
| TU1661834 | other | downstream | 23057 | 43482260 ~ 43483693 (+) | True | G1452359 |
| TU1661837 | other | downstream | 31971 | 43491174 ~ 43492068 (+) | True | G1452362 |
| TU1661856 | other | downstream | 82461 | 43541664 ~ 43563701 (+) | False | G1452369 |
| TU1661935 | other | downstream | 147110 | 43606313 ~ 43606781 (+) | True | G1452399 |
| TU1662359 | other | downstream | 1053866 | 44513069 ~ 44520477 (+) | True | G1452804 |
