Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046259 |
| length | 807 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | XLOC_023391 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 18736916 ~ 18877118 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0032012 | regulation of ARF protein signal transduction | biological_process |
| id | description |
|---|---|
| ZDB-GENE-030131-108 | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within protein transport and regulation of ARF protein signal transduction. Predicted to be located in Golgi apparatus and perinuclear region of cytoplasm. Is expressed in brain. Orthologous to human ARFGEF1 (ADP ribosylation factor guanine nucleotide exchange factor 1). |
| ensembl_id | ENSDART00000152009 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00046254 | lncRNA | downstream | 222727 | 18560253 ~ 18568486 (-) | False | XLOC_023389 |
| TCONS_00046243 | lncRNA | downstream | 324175 | 18460675 ~ 18467038 (-) | True | XLOC_023386 |
| TCONS_00046239 | lncRNA | downstream | 344609 | 18444191 ~ 18446604 (-) | False | XLOC_023385 |
| TCONS_00046240 | lncRNA | downstream | 344609 | 18445687 ~ 18446604 (-) | True | XLOC_023385 |
| TCONS_00046238 | lncRNA | downstream | 346134 | 18444191 ~ 18445079 (-) | False | XLOC_023385 |
| TCONS_00046267 | lncRNA | upstream | 899102 | 19708535 ~ 19709047 (-) | False | XLOC_023394 |
| TCONS_00046853 | lncRNA | upstream | 1149483 | 19958916 ~ 19962882 (-) | False | XLOC_023395 |
| TCONS_00046854 | lncRNA | upstream | 1151439 | 19960872 ~ 19962882 (-) | True | XLOC_023395 |
| TCONS_00046271 | lncRNA | upstream | 1201149 | 20010582 ~ 20012032 (-) | True | XLOC_023396 |
| TCONS_00046275 | lncRNA | upstream | 1251258 | 20060691 ~ 20062056 (-) | False | XLOC_023398 |
| TCONS_00046251 | mRNA | downstream | 106204 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046252 | mRNA | downstream | 106204 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046250 | mRNA | downstream | 106204 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046249 | mRNA | downstream | 106204 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046253 | mRNA | downstream | 132066 | 18521060 ~ 18659147 (-) | False | XLOC_023389 |
| TCONS_00046260 | mRNA | upstream | 70821 | 18880254 ~ 18919649 (-) | False | XLOC_023392 |
| TCONS_00046261 | mRNA | upstream | 74196 | 18883629 ~ 18919571 (-) | False | XLOC_023392 |
| TCONS_00046262 | mRNA | upstream | 86114 | 18895547 ~ 18919562 (-) | False | XLOC_023392 |
| TCONS_00046265 | mRNA | upstream | 898176 | 19707609 ~ 19718077 (-) | False | XLOC_023394 |
| TCONS_00046266 | mRNA | upstream | 898179 | 19707612 ~ 19718077 (-) | False | XLOC_023394 |
| TCONS_00046256 | other | downstream | 165846 | 18625252 ~ 18625367 (-) | True | XLOC_023390 |
| TCONS_00046255 | other | downstream | 192572 | 18560430 ~ 18598641 (-) | True | XLOC_023389 |
| TCONS_00046245 | other | downstream | 305722 | 18470166 ~ 18485491 (-) | False | XLOC_023387 |
| TCONS_00046247 | other | downstream | 305802 | 18473781 ~ 18485411 (-) | True | XLOC_023387 |
| TCONS_00046242 | other | downstream | 334629 | 18453172 ~ 18456584 (-) | False | XLOC_023386 |
| TCONS_00046263 | other | upstream | 100584 | 18910017 ~ 18919557 (-) | True | XLOC_023392 |
| TCONS_00046264 | other | upstream | 479221 | 19288654 ~ 19288768 (-) | True | XLOC_023393 |
| TCONS_00046272 | other | upstream | 1222898 | 20032331 ~ 20054257 (-) | False | XLOC_023397 |
| TCONS_00046273 | other | upstream | 1222907 | 20032340 ~ 20039150 (-) | True | XLOC_023397 |
| TCONS_00046277 | other | upstream | 1377883 | 20187316 ~ 20187430 (-) | True | XLOC_023401 |
