RNA id: XM_021568614.2



Basic Information


Item Value
RNA id XM_021568614.2
length 1247
RNA type mRNA
GC content 0.52
exon number 8
gene id LOC110493975
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46376260 ~ 46436526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAACTGTAATTGGAGTCCGATTTATGTTCTCCACCTATACGCGTTGAGATTACTGGCCGTCCTGGAAAGTGACCTTTTCTTGTGAGTATTTTGTCCGCGACGCGCTGTGGCGGCTACGGTTGCTTTCACATTATTGTAGACTTGTAAAGTATCCTAGTGTAGGGCagtgtttttttaaatacaggTTAATACAAGCCGACCATTGACCATGGGAGGCAGTGAAAGTACGAGGAGAAAAGTGTCATTCGGCCTGGATGAAGAAGAGAAGGTCACAGTCATTCACGGAGTTAAGCTCTCAGGGGAGCTGATGCAGCGGATGCGAGATTCGCAGGGAACGGACGGAGTCAATCCACCGCCACCCCAGCCTGGCAGCCACAAACCTGCACCAGGTCCAAGACCTGGCCCCACTGCTGCCGAGGCACAGGAGGAGCTGCGGAGGAAGTTTGAGAGGGAGCAGGCCCAAGTGCAGGAGCAACTGTTTCGACTGGCCCAGAGGGAAAAAGAAGCAGCAGCAGCCACAgcggggaggaaaggagagactcACGACGGCCTGAACCCTGCCGTGCTCCGAGAGAAGGGCAAGACCCACGAGGAGCTGATGAAGGCCAAACAACTGGCCAAGCAGCTGGAAAGGAAAGAGGCTGAACTGCAACACCTGGCGGCCTTCTACAAGGAACAGCTACACATCTTGGAGAAGAAGAATCTCGACTACTACCAGCAGACGTCTGAGCAGTACAACGAGGCAGCCGACAAGGCCGAGGCCCATATCAAGCCCAGACCTGCGGTGTCTATCTGTCCTGAGCTGCAGGCCCAGGTGTTACACTGCTACAAAGAGAACCAGCAGCAGACTCTCCACTGCTCCACCGTGGCCAAGGAGTACATGGATTGCATCCAAGCTGCCAAGAAGACCCTGCTGATAAACCACGGTTGAGAAAGAACAAGAAaccaaagaagagaaggaaggcgcgggggaggagaaggagagcagCACATCCATCTTCCCCCATCACTTTAAATCACCCTCCATTTTCTGTCTAAACTAATCCAACTGGGCCCAACTCCACTCGGACTCAATCCAGCACTACCTACCACTATACCTACCGCATGCCTTCTCTCCCTTTTTCCATGTCCTTGTTTTGGAGTGTATTATCTTGATTTGTCATCTGTAGTGCATTGTCTTGATTTATTTTGAAATTGCACTGGCACATCCTTCAGGGCTCAAATAAATCCTTCCAATCCTGACAAAA

Function


GO: NA

KEGG:

id description
K17564 CHCHD6; MICOS complex subunit MIC25

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1664897 lncRNA upstream 78540 46297509 ~ 46297720 (+) True G1455131
TU1664871 lncRNA upstream 98021 46277115 ~ 46278239 (+) True LOC110493971
TU1664831 lncRNA upstream 180250 46195795 ~ 46196010 (+) True G1455069
TU1664830 lncRNA upstream 181664 46194377 ~ 46194596 (+) True G1455068
TU1664829 lncRNA upstream 182052 46193860 ~ 46194208 (+) True G1455067
TU1665472 lncRNA downstream 26860 46463386 ~ 46463600 (+) True G1455669
TU1665482 lncRNA downstream 32677 46469203 ~ 46469462 (+) True G1455679
TU1665613 lncRNA downstream 163482 46600008 ~ 46600165 (+) True G1455800
TU1665620 lncRNA downstream 164197 46600723 ~ 46601041 (+) True G1455806
TU1665626 lncRNA downstream 167030 46603556 ~ 46605067 (+) True G1455810
XM_021568611.2 mRNA upstream 273 46363032 ~ 46375987 (+) True tpra1
XM_021568609.2 mRNA upstream 15226 46353930 ~ 46361034 (+) False LOC110493973
XM_021568610.2 mRNA upstream 15226 46354786 ~ 46361034 (+) True LOC110493973
XM_021568608.2 mRNA upstream 30102 46309736 ~ 46346158 (+) False LOC110493972
XM_036949987.1 mRNA downstream 76152 46512678 ~ 46802202 (+) True LOC110493976
XM_021568621.2 mRNA downstream 673197 47109723 ~ 47134585 (+) False LOC110493980
XM_021568622.2 mRNA downstream 673197 47109723 ~ 47134585 (+) False LOC110493980
XM_021568623.2 mRNA downstream 673197 47109723 ~ 47134585 (+) True LOC110493980
XM_021568624.2 mRNA downstream 698638 47135164 ~ 47136870 (+) True LOC110493981
TU1664577 other upstream 517759 45856249 ~ 45858501 (+) True G1454824
TU1663824 other upstream 1039737 45335294 ~ 45336523 (+) True G1454127
TU1663743 other upstream 1116689 45258475 ~ 45259571 (+) True G1454049
TU1663604 other upstream 1305335 45069971 ~ 45070925 (+) True G1453914
TU1663579 other upstream 1325255 45050729 ~ 45051005 (+) True G1453889
TU1666430 other downstream 791693 47228219 ~ 47228796 (+) True G1456570
TU1666845 other downstream 1368832 47805358 ~ 47807481 (+) True LOC100135862
TU1666865 other downstream 1397054 47833580 ~ 47839370 (+) True G1456969
TU1666965 other downstream 1594388 48030914 ~ 48036583 (+) True glrx
TU1667106 other downstream 1952556 48389082 ~ 48424405 (+) False LOC110494013

Expression Profile