Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1666845 |
| length | 660 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC100135862 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 47805358 ~ 47807518 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005183 | gonadotropin hormone-releasing hormone activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1666814 | lncRNA | upstream | 77323 | 47727795 ~ 47728035 (+) | True | G1456920 |
| TU1666775 | lncRNA | upstream | 90611 | 47713943 ~ 47714747 (+) | True | G1456883 |
| TU1666780 | lncRNA | upstream | 95592 | 47707696 ~ 47709766 (+) | True | G1456888 |
| TU1666781 | lncRNA | upstream | 99433 | 47704632 ~ 47705925 (+) | True | G1456889 |
| TU1666810 | lncRNA | upstream | 103784 | 47701339 ~ 47701574 (+) | True | G1456916 |
| TU1666953 | lncRNA | downstream | 169453 | 47976934 ~ 47977139 (+) | True | G1457051 |
| TU1666995 | lncRNA | downstream | 268885 | 48076366 ~ 48076682 (+) | True | G1457091 |
| TU1666998 | lncRNA | downstream | 280124 | 48087605 ~ 48087822 (+) | True | G1457093 |
| TU1667050 | lncRNA | downstream | 392560 | 48200041 ~ 48200356 (+) | True | G1457137 |
| TU1667066 | lncRNA | downstream | 458483 | 48265964 ~ 48266185 (+) | True | G1457153 |
| XM_021568643.2 | mRNA | upstream | 15345 | 47744356 ~ 47790013 (+) | False | LOC110493993 |
| XM_021568644.2 | mRNA | upstream | 15345 | 47744358 ~ 47790013 (+) | False | LOC110493993 |
| XM_021568641.2 | mRNA | upstream | 15345 | 47744360 ~ 47790013 (+) | False | LOC110493993 |
| XM_021568645.2 | mRNA | upstream | 15345 | 47744360 ~ 47790013 (+) | False | LOC110493993 |
| XM_021568642.2 | mRNA | upstream | 15345 | 47760598 ~ 47790013 (+) | False | LOC110493993 |
| NM_001124008.1 | mRNA | downstream | 7410 | 47814891 ~ 47818587 (+) | True | LOC100136222 |
| XR_005036992.1 | mRNA | downstream | 21234 | 47828715 ~ 47833280 (+) | True | LOC118940470 |
| XM_021568647.2 | mRNA | downstream | 131465 | 47938946 ~ 47971144 (+) | True | LOC110493995 |
| XM_021568648.2 | mRNA | downstream | 173500 | 47980981 ~ 47985604 (+) | False | LOC110493996 |
| XM_036949993.1 | mRNA | downstream | 173500 | 47980981 ~ 47985604 (+) | True | LOC110493996 |
| TU1666430 | other | upstream | 576562 | 47228219 ~ 47228796 (+) | True | G1456570 |
| TU1664577 | other | upstream | 1946857 | 45856249 ~ 45858501 (+) | True | G1454824 |
| TU1663824 | other | upstream | 2468835 | 45335294 ~ 45336523 (+) | True | G1454127 |
| TU1663743 | other | upstream | 2545787 | 45258475 ~ 45259571 (+) | True | G1454049 |
| TU1663604 | other | upstream | 2734433 | 45069971 ~ 45070925 (+) | True | G1453914 |
| TU1666865 | other | downstream | 26099 | 47833580 ~ 47839370 (+) | True | G1456969 |
| TU1666965 | other | downstream | 223433 | 48030914 ~ 48036583 (+) | True | glrx |
| TU1667106 | other | downstream | 581601 | 48389082 ~ 48424405 (+) | False | LOC110494013 |
| TU1668086 | other | downstream | 885840 | 48693321 ~ 48721244 (+) | False | bsnb |
| TU1668190 | other | downstream | 1115326 | 48922807 ~ 48928262 (+) | False | erc2 |
