RNA id: TCONS_00046283


Basic Information

Item Value
RNA id TCONS_00046283
length 3990
RNA type mRNA
GC content 0.47
exon number 30
gene id XLOC_023405
representative False

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 20332979 ~ 20369760 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGAGCTGTCAGTATATGGTGCGTTTTGCTCCAGATTCTCTAGCAGACTATGAAGACGCTCTGGTTGTGGAGACGCAGATGCTCTATCCTCTCATTATACCAATAGAAGCCTGCAGATCTCCTCCGATACTCACCTTGCCGGCTGTCATGGACTGTGGTTTCTGCCTGGTGGGAGGAGTGAAGTTTATGGAGGTTTTATGTCGGAATGAAGGACTGAGTGCTGGAACGTTTTGTGTAATGCCTAAGAAACAGTGGCCTGCTTCAAGCCTCAGGTCTGCAGTGAAGTCGACTTTCACAGAACAGCCTCCCTTTGCTATCAGTCCCTCTATTTTCGGCCTTCACCCTGGACAGGCTACTGTCATAGAGgttgtgtttttccccacaaCTCCTGAGCTCTCTACTCAAGACTTCACCATTGTCTGTGACAACTGCCAAGTGAAGGACATTACGCTCCAAGGTACTGGTCAACTGATCACTGTGGAGCTGCTTTCAGTATCAGGTGGAGAGGATCAGCCTGAATTTGCAGAATTGTGTGACATCACAGCTGACCATTATGTCAGATTTAACACAACCAATCCACACTCTACCCTGCAGAAGACACTGGTTGTCAAAAACAACACACATTTGGAGCTTCCATATCACTGGCAGATCATGAAGCCCAGTCTTCAATGCTTGTTGCCCGGAGAGACTCCTGACCCTTCCAGCATTCAGCATCTTCTTGATACAGACAGTGCATTCAGCATCAGTCCTGTTATAGGAATCCTGAACCCTGCACAGGAACACGAGTTCCTGCTCACCTATGCTCCCAAAGATATAAAAGATTACCACAGTGTCTGCCACTTGGTGATTATGGATGTTCCCAGTCCACCTAAAGTCTGTGACGATGGGACATGTCCTGATACTGCACTCCATGCAAACAATGTGACCATTTTAGAGGTTGAAGTGAAAGGTTCTACTGAGCCATACAAGATCCTTCTTGAGCCGTATGCTGTTTTAATACCAGGAGAGACCTATATACACAACACAATTTGCAAGAGATTCAAGATGTGGAATCACAGCAAATCagtcattcactttgaatgggaaCGTGTTATTGACAGTCATGTAATTGAAGTGGAGCCCTCATCTGGAGTAATAGAAATGAATGAGTGTTTTGACATGGAGTTGTATCTGACTGGAAGGAGTCCGGGTCATTTTACCTCTACCCTGCAGTGTCACATTCTGCACCATCCTAAAACTATAGGACTTGCCATTGAGGCCACATTTAAGGGTCCACATTGCTCATTGAATGTACCCAGTCTGGATTTTGGTTTGCTGCAAATGGGAAATGAGAGAATTTTGACTATTGAAGTCACCAACAACAGCCTGCTAGATGCCCACTGGAGCCTGGAGGTGCTGTCCCAAACCCAGAAGCTCATCGATGGACAGGTGCATATAAATCCAAATAAAGGTGTTCTGGCTGCACTAGAGAGCTGCAGTGTGGATGTGGCCTTCAGAGCCATGCATTGCCAAGTATTTGAGTCAGTTTTACAACTTTCTGTGCTGAACGGCACCGGTTGTCACGTCTCCATCCATGCCGTTGTTCAGTCTCCTCAAGTGTGCTTGCTGAACTGTGAGTTGCTGTTTGCTGATCTGTATGTTGGGGTTTCACAGACGGGCAGTGTCACTCTGTTTAACCAAACACTACTGCCAGCTCACTTCACCTGGGGCAGGCTTCAAGGTTCACAAGCTCATCTCTGCTCCGCAGTCTTCAGTCCCTCTGCAGGATCTCTGGGGCCCAATGCAAAAACTGAAGTCTCTGTGTCATTCACAGCTCACACTGTTgaGGATTTGACTGAAGTGAATGGAGTTTGTGAGGTAAAAGGAATGGAGAATCCACTTGTGCTGGGAATTTTTTCTAAAGCCAAACCTCTCAGAGTTTCCTACTCACTGCTTTGTAATGGTATTAATTCAGGTGATGGCGATCACCAACCAATCCTGCTGGACTTCACTGAGCATGAGCCAGCCGTCATTGGGAAATCTGTCAAACGGCAGTTACTGATAACTAACAACACTGCTATTACTGCTCCATTCACTGTCGACACTGAGTACTTCACTGGAGACTGTCCTTCACAATCAGAAGGAAACTCTGAAAGAAGCAGTGCACCTTTCCACTCCATCCAGGccaaaaaaatacagcaaaaggCATATGATGAGTTTGTAAGCCGTCTGCTTTCCCATGGAAGAGGTGCAACATTTTATGTAGAACCAAAAAGTGGGATGCTTGGCCCATTCGAGAGTCAAACCATCAACATCACTACTTTCACAAATATGTGGGGGGATTATCAGGACAACCTCATATGCAAAGTTGGAGATCTAAATCCAACTCACATTCATATGAAGATGTCTGTGAGGGGCTGTCCAGTTTACTTTCAGATGATTGGACCACAGCCTGACAATCAGAATCAGGGTCCAGTTATTAGATTTGGAAGCCATGTTTCTGGAGGAGACACTGTGTCACGCTCTTTACGACTCATTAACACCAGTCCATATGATATCCGTATGGACTGGGTGACCTACAACCTGGAGGCTGGAGACGGCAAGCTGATAGATCTGCTGCTTGCATGTGGTGAACCTTTCCCTCTGAAGGATGCAGATGGCAATGAGGTTGTTGGAGGACTGGACTCATCTGTCATGTTCCCGTCCACATGGGATGACAGTCACACCCCCAGCAGAGAAGGAACAAGCTCAACTTTTATGACCCAATCTgATGATTTTGTAGAGAATGGTGAAGAATGTGATGGAGAAGATGGCAGTGGGGCTTCTGAGTCTCTAGCTCCAGTGAAGAAgctgttttctgtgtttttgaagcCTCATGAAGGGACTCTTTCTGACTACCCATACTGCATCACTCCACAGCAGACTGTAGTTCCAGCAGGGGGCAGTAGCACCATTCATTTGTCTTTCACTCCCCTGATTCTGTCATGTTCAACCAATCAAAGATGTTTGGGTTACGCTCTTGGTTTCATGAGCTTAGACTCTAAGCTTGCGTTAGTGACTCCAGGCAAGGTGGAGAGAGTCCGGGGCTATGAACTTCAACCTTTGAGGCTGGACATGCAGGCTAATGTAAAACCTGCCATtttgtcAGTGCAGATGGCAGAGGATACAGAAGTGCTGGAATTCAGCGCAGCTGCCAGCGACACACTAGACGGAGCATCACAAACACAGGAATCCAGGATAACTCGCACATTCCGGCTAAAGAACGACACAGACATGGCCTTGAGTTTCAAACTGAGCACAAATCCACCATTTTCAGTGCTGCTGCCCCGACAGAGCCTTAAACTGATCAGCAGCTCGCCTGCTTATAGACACACACAAGGTCTGTCCGGACCAGGAGATGAGATGAGATTATTTCTGTTACAGCCCAAAAACATCATTCAGGTTAAGGTGGCTTTCCACAATTCCGCTTCACTCCTGGCCTGTGTAAATGGAGCATGTGAGGAGTCGGACAGTCAGCTCTCTGCTTCCCTTCTTTGCAGTGATGATGGAGGAAAAACTCTACAGTTTCAGGAGAACTTGACCATTCAGTACAGCAATAACAGCATACAGACAGTCTCTCTTTACGCTCGTCTGGCATTACCTACACTACACCTGTCCAGTGCCACTGTGGATTTTGGCACCTGTTATGTTGGACAAACAACTGTCAAAGAGATTTATCTTCACAACAGAGGTGGCTCCTGTAGCTACTGGACCACACTCACAGaTGGCAATGAAGTGTTCAGGGTAAGTCCGGATTCTGGTTTACTGAAACCTCTTGGAGATCCAGCGTCCTGTAGACAGCTGCTGCAGATCAGCTTCACTCCGAGAGAACAGAAAGAGTTCCAGACAATCTTCACAGTGCAGGGGCTTCTTGGAGAGACACCACTTGTTCTAAAGGTCAGCGGAAGAGGATCATTTGATGAGAGTTTTGTATCTCCAATAACTGACAGCTCACAAAACAACACTGAGTAA

Function

GO:

id name namespace
GO:0008285 negative regulation of cell population proliferation biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-091204-65 Predicted to act upstream of or within negative regulation of cell population proliferation. Human ortholog(s) of this gene implicated in acute myeloid leukemia. Orthologous to human DLEC1 (DLEC1 cilia and flagella associated protein).

Ensembl:

ensembl_id ENSDART00000109223

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00047174 lncRNA downstream 148082 20181997 ~ 20185025 (-) True XLOC_023400
TCONS_00046274 lncRNA downstream 270057 20060691 ~ 20063050 (-) True XLOC_023398
TCONS_00046275 lncRNA downstream 271051 20060691 ~ 20062056 (-) False XLOC_023398
TCONS_00046271 lncRNA downstream 321075 20010582 ~ 20012032 (-) True XLOC_023396
TCONS_00046854 lncRNA downstream 370225 19960872 ~ 19962882 (-) True XLOC_023395
TCONS_00047175 lncRNA upstream 90677 20450027 ~ 20501301 (-) False XLOC_023407
TCONS_00046288 lncRNA upstream 91265 20450615 ~ 20470991 (-) False XLOC_023407
TCONS_00046290 lncRNA upstream 91488 20450838 ~ 20469290 (-) False XLOC_023407
TCONS_00046291 lncRNA upstream 111428 20470778 ~ 20501301 (-) False XLOC_023407
TCONS_00046315 lncRNA upstream 777825 21137175 ~ 21139396 (-) False XLOC_023418
TCONS_00046280 mRNA downstream 12095 20214418 ~ 20321012 (-) False XLOC_023404
TCONS_00046281 mRNA downstream 12627 20229240 ~ 20320480 (-) True XLOC_023404
TCONS_00046279 mRNA downstream 124633 20194022 ~ 20208474 (-) True XLOC_023403
TCONS_00046278 mRNA downstream 140111 20188914 ~ 20192996 (-) True XLOC_023402
TCONS_00046276 mRNA downstream 180142 20064088 ~ 20152965 (-) True XLOC_023399
TCONS_00046285 mRNA upstream 59609 20418959 ~ 20444844 (-) True XLOC_023406
TCONS_00046287 mRNA upstream 90677 20450027 ~ 20531813 (-) False XLOC_023407
TCONS_00046289 mRNA upstream 91454 20450804 ~ 20531474 (-) False XLOC_023407
TCONS_00046293 mRNA upstream 230108 20589458 ~ 20599781 (-) False XLOC_023408
TCONS_00046294 mRNA upstream 230328 20589678 ~ 20599880 (-) False XLOC_023408
TCONS_00046277 other downstream 145677 20187316 ~ 20187430 (-) True XLOC_023401
TCONS_00046272 other downstream 278850 20032331 ~ 20054257 (-) False XLOC_023397
TCONS_00046273 other downstream 293957 20032340 ~ 20039150 (-) True XLOC_023397
TCONS_00046264 other downstream 1044339 19288654 ~ 19288768 (-) True XLOC_023393
TCONS_00046263 other downstream 1413550 18910017 ~ 18919557 (-) True XLOC_023392
TCONS_00046286 other upstream 90677 20450027 ~ 20531586 (-) False XLOC_023407
TCONS_00046292 other upstream 111604 20470954 ~ 20471090 (-) True XLOC_023407
TCONS_00046297 other upstream 288125 20647475 ~ 20658668 (-) False XLOC_023409
TCONS_00046316 other upstream 779972 21139322 ~ 21144300 (-) True XLOC_023418
TCONS_00046357 other upstream 1603702 21963052 ~ 21963168 (-) True XLOC_023437

Expression Profile

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