Item | Value |
---|---|
RNA id | TU1669107 |
length | 370 |
lncRNA type | sense_over |
GC content | 0.55 |
exon number | 2 |
gene id | cacna1da |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 49478916 ~ 49594500 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1669088 | lncRNA | upstream | 2983 | 49475545 ~ 49475959 (+) | True | G1458935 |
TU1669084 | lncRNA | upstream | 7510 | 49470914 ~ 49471432 (+) | True | G1458931 |
TU1669080 | lncRNA | upstream | 9381 | 49469281 ~ 49469561 (+) | True | G1458927 |
TU1669072 | lncRNA | upstream | 12897 | 49465844 ~ 49466045 (+) | True | G1458919 |
TU1668960 | lncRNA | upstream | 33788 | 49444808 ~ 49445154 (+) | True | G1458811 |
TU1669175 | lncRNA | downstream | 99653 | 49587952 ~ 49588882 (+) | True | G1458992 |
TU1669189 | lncRNA | downstream | 176207 | 49664506 ~ 49664931 (+) | True | G1458998 |
TU1669188 | lncRNA | downstream | 178199 | 49666498 ~ 49667783 (+) | True | G1458997 |
TU1669219 | lncRNA | downstream | 180912 | 49669211 ~ 49669661 (+) | False | G1459027 |
TU1669222 | lncRNA | downstream | 180912 | 49669211 ~ 49669740 (+) | True | G1459027 |
XM_021568713.2 | mRNA | upstream | 159325 | 49309152 ~ 49319617 (+) | True | LOC110494034 |
XM_036950022.1 | mRNA | upstream | 358525 | 49010008 ~ 49120417 (+) | False | LOC110494028 |
XR_005036997.1 | mRNA | upstream | 443018 | 49033962 ~ 49035924 (+) | True | LOC118940474 |
XM_021568700.2 | mRNA | upstream | 450617 | 49010008 ~ 49028325 (+) | False | LOC110494028 |
XM_021570293.2 | mRNA | downstream | 116364 | 49604663 ~ 49657967 (+) | True | LOC110494954 |
XM_036948186.1 | mRNA | downstream | 692746 | 50181045 ~ 50192699 (+) | False | LOC110494957 |
XM_021570299.2 | mRNA | downstream | 692751 | 50181050 ~ 50192699 (+) | False | LOC110494957 |
XM_021570327.2 | mRNA | downstream | 708804 | 50197103 ~ 50207320 (+) | True | LOC110494976 |
XM_021570338.2 | mRNA | downstream | 734342 | 50222641 ~ 50229675 (+) | True | LOC110494984 |
TU1668956 | other | upstream | 39613 | 49439006 ~ 49439329 (+) | True | G1458807 |
TU1668189 | other | upstream | 438586 | 48933340 ~ 49040356 (+) | True | erc2 |
TU1668185 | other | upstream | 540920 | 48928347 ~ 48938022 (+) | False | erc2 |
TU1669722 | other | downstream | 692866 | 50181165 ~ 50183696 (+) | True | LOC110494957 |
TU1669855 | other | downstream | 942508 | 50430807 ~ 50435706 (+) | False | atxn7l2a |
TU1670065 | other | downstream | 1288230 | 50776529 ~ 50777072 (+) | True | G1459769 |
TU1670568 | other | downstream | 1406641 | 50894940 ~ 50897444 (+) | True | LOC110494047 |
TU1670644 | other | downstream | 1591833 | 51080132 ~ 51090889 (+) | False | G1460249 |