Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036950214.1 |
| length | 1100 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 8 |
| gene id | LOC110494133 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 55785027 ~ 55789929 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02941 | RP-LP0, RPLP0; large subunit ribosomal protein LP0 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1676734 | lncRNA | upstream | 178758 | 55606145 ~ 55606389 (+) | True | G1465932 |
| TU1676668 | lncRNA | upstream | 234893 | 55549921 ~ 55550254 (+) | True | G1465866 |
| TU1676634 | lncRNA | upstream | 263007 | 55521903 ~ 55522140 (+) | True | G1465833 |
| TU1676567 | lncRNA | upstream | 307562 | 55477292 ~ 55477585 (+) | True | G1465770 |
| TU1676026 | lncRNA | upstream | 708420 | 55076458 ~ 55076727 (+) | True | G1465242 |
| TU1676826 | lncRNA | downstream | 27132 | 55817061 ~ 55819025 (+) | False | LOC110494141 |
| TU1676827 | lncRNA | downstream | 27132 | 55817061 ~ 55819195 (+) | False | LOC110494141 |
| TU1676828 | lncRNA | downstream | 27132 | 55817061 ~ 55818329 (+) | False | LOC110494141 |
| TU1676825 | lncRNA | downstream | 27219 | 55817148 ~ 55818329 (+) | True | LOC110494141 |
| TU1676837 | lncRNA | downstream | 35121 | 55825050 ~ 55828276 (+) | True | LOC118940477 |
| XM_036950212.1 | mRNA | upstream | 326 | 55729800 ~ 55784821 (+) | False | LOC110493221 |
| XM_036950209.1 | mRNA | upstream | 15041 | 55729786 ~ 55770106 (+) | False | LOC110493221 |
| XM_036950210.1 | mRNA | upstream | 15041 | 55750600 ~ 55770106 (+) | False | LOC110493221 |
| XM_036950211.1 | mRNA | upstream | 15041 | 55750601 ~ 55770106 (+) | True | LOC110493221 |
| XM_021568911.2 | mRNA | upstream | 60539 | 55721363 ~ 55724608 (+) | True | LOC110494139 |
| XM_021568914.2 | mRNA | downstream | 22019 | 55811948 ~ 55818326 (+) | False | LOC110494141 |
| XR_005037018.1 | mRNA | downstream | 34670 | 55824599 ~ 55828869 (+) | False | LOC118940477 |
| XM_036948421.1 | mRNA | downstream | 143643 | 55933572 ~ 55946587 (+) | True | LOC110493222 |
| XM_021568904.2 | mRNA | downstream | 240194 | 56030123 ~ 56039321 (+) | False | LOC110494134 |
| XM_021568902.2 | mRNA | downstream | 240195 | 56030124 ~ 56039321 (+) | True | LOC110494134 |
| TU1674965 | other | upstream | 1310675 | 54471705 ~ 54474472 (+) | False | LOC110494110 |
| TU1674964 | other | upstream | 1311275 | 54471945 ~ 54473872 (+) | True | LOC110494110 |
| TU1674872 | other | upstream | 1520531 | 54256381 ~ 54264616 (+) | True | LOC110494100 |
| TU1674769 | other | upstream | 1595530 | 54174014 ~ 54189617 (+) | True | G1464092 |
| TU1670644 | other | upstream | 4694258 | 51080132 ~ 51090889 (+) | False | G1460249 |
| TU1676946 | other | downstream | 206719 | 55996648 ~ 55998174 (+) | False | G1466124 |
| TU1676956 | other | downstream | 225648 | 56015577 ~ 56016613 (+) | False | G1466131 |
| TU1676957 | other | downstream | 225648 | 56015577 ~ 56016613 (+) | True | G1466131 |
| TU1676992 | other | downstream | 298249 | 56088178 ~ 56127481 (+) | True | LOC110494143 |
| TU1677057 | other | downstream | 429313 | 56219242 ~ 56220946 (+) | True | G1466224 |
