Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1677370 |
| length | 560 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | dnai1.2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 56130667 ~ 56167366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
56,128,000
56,130,000
56,132,000
56,134,000
56,136,000
56,138,000
56,140,000
56,142,000
56,144,000
56,146,000
56,148,000
56,150,000
56,152,000
56,154,000
56,156,000
56,158,000
56,160,000
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1677358 | lncRNA | downstream | 18138 | 56110249 ~ 56112628 (-) | True | G1466494 |
| TU1677328 | lncRNA | downstream | 52813 | 56025359 ~ 56077953 (-) | True | G1466464 |
| TU1677349 | lncRNA | downstream | 55207 | 56074152 ~ 56075559 (-) | True | G1466485 |
| TU1677351 | lncRNA | downstream | 62923 | 56066385 ~ 56067843 (-) | True | G1466487 |
| TU1677295 | lncRNA | downstream | 179676 | 55950796 ~ 55951090 (-) | True | G1466432 |
| TU1678331 | lncRNA | upstream | 109391 | 56254579 ~ 56254788 (-) | True | G1467342 |
| TU1678334 | lncRNA | upstream | 118802 | 56263990 ~ 56264229 (-) | True | G1467345 |
| TU1678340 | lncRNA | upstream | 125783 | 56270971 ~ 56271170 (-) | True | G1467351 |
| TU1678344 | lncRNA | upstream | 134346 | 56279534 ~ 56279848 (-) | True | G1467355 |
| TU1678360 | lncRNA | upstream | 157423 | 56302611 ~ 56302858 (-) | True | G1467371 |
| XM_021568896.2 | mRNA | downstream | 114668 | 55989707 ~ 56016098 (-) | True | LOC110494129 |
| XM_021568897.2 | mRNA | downstream | 132448 | 55989707 ~ 55998318 (-) | False | LOC110494129 |
| XM_036950219.1 | mRNA | downstream | 142675 | 55981511 ~ 55988091 (-) | True | LOC110494136 |
| XM_036950220.1 | mRNA | downstream | 143972 | 55981511 ~ 55986794 (-) | False | LOC110494136 |
| XM_021568907.2 | mRNA | downstream | 159765 | 55956304 ~ 55971001 (-) | False | LOC110494137 |
| XM_021568925.2 | mRNA | upstream | 64288 | 56209476 ~ 56221654 (-) | False | LOC110494148 |
| XM_021568926.2 | mRNA | upstream | 64288 | 56209476 ~ 56221659 (-) | False | LOC110494148 |
| XM_036950226.1 | mRNA | upstream | 64288 | 56209476 ~ 56221661 (-) | False | LOC110494148 |
| XM_021568924.2 | mRNA | upstream | 64288 | 56209476 ~ 56221662 (-) | True | LOC110494148 |
| XR_005037019.1 | mRNA | upstream | 102898 | 56248086 ~ 56253169 (-) | False | pnp4a |
| TU1677293 | other | downstream | 160052 | 55954473 ~ 55970714 (-) | True | LOC110494137 |
| TU1675710 | other | downstream | 1402871 | 54726796 ~ 54727895 (-) | True | G1464954 |
| TU1675706 | other | downstream | 1413276 | 54716104 ~ 54717490 (-) | True | G1464950 |
| TU1675686 | other | downstream | 1456847 | 54672252 ~ 54673919 (-) | True | G1464933 |
| TU1675279 | other | downstream | 1667064 | 54462671 ~ 54463702 (-) | True | G1464551 |
| TU1677371 | other | upstream | 17672 | 56162860 ~ 56167337 (-) | True | dnai1.2 |
| TU1678487 | other | upstream | 349668 | 56494856 ~ 56500200 (-) | False | elmo2 |
| TU1678489 | other | upstream | 349668 | 56494856 ~ 56500325 (-) | False | elmo2 |
| TU1678490 | other | upstream | 349668 | 56494856 ~ 56500135 (-) | True | elmo2 |
| TU1678904 | other | upstream | 1084319 | 57229507 ~ 57232707 (-) | False | hig1a |
