Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1677617 |
| length | 301 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 4 |
| gene id | LOC110494160 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 56575737 ~ 56584088 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1677652 | lncRNA | upstream | 20553 | 56559513 ~ 56559838 (+) | True | G1466742 |
| TU1677604 | lncRNA | upstream | 43646 | 56533668 ~ 56536745 (+) | True | G1466707 |
| TU1677606 | lncRNA | upstream | 74254 | 56494854 ~ 56506137 (+) | True | G1466708 |
| TU1677596 | lncRNA | upstream | 96979 | 56480987 ~ 56483412 (+) | True | G1466702 |
| TU1677476 | lncRNA | upstream | 205665 | 56369855 ~ 56374726 (+) | True | LOC110494151 |
| TU1677689 | lncRNA | downstream | 61793 | 56644514 ~ 56644724 (+) | True | G1466775 |
| TU1677706 | lncRNA | downstream | 85829 | 56668550 ~ 56671026 (+) | False | G1466787 |
| TU1677710 | lncRNA | downstream | 85829 | 56668550 ~ 56671026 (+) | False | G1466787 |
| TU1677714 | lncRNA | downstream | 85829 | 56668550 ~ 56671026 (+) | False | G1466787 |
| TU1677715 | lncRNA | downstream | 85829 | 56668550 ~ 56671026 (+) | True | G1466787 |
| XM_036950240.1 | mRNA | upstream | 24285 | 56553505 ~ 56556106 (+) | True | LOC110494158 |
| XM_021568931.2 | mRNA | upstream | 106616 | 56461343 ~ 56473775 (+) | False | rbck1 |
| XM_021568932.2 | mRNA | upstream | 106616 | 56461343 ~ 56473775 (+) | False | rbck1 |
| XM_021568933.2 | mRNA | upstream | 106616 | 56461343 ~ 56473775 (+) | True | rbck1 |
| XM_021568930.2 | mRNA | upstream | 128014 | 56447092 ~ 56452377 (+) | False | LOC110494152 |
| XM_021568951.2 | mRNA | downstream | 2138 | 56584859 ~ 56591591 (+) | False | LOC110494159 |
| XM_036950246.1 | mRNA | downstream | 2143 | 56584864 ~ 56591591 (+) | True | LOC110494159 |
| XM_021568958.2 | mRNA | downstream | 15684 | 56598405 ~ 56617378 (+) | False | LOC110494162 |
| XM_021568959.2 | mRNA | downstream | 26820 | 56609541 ~ 56617378 (+) | True | LOC110494162 |
| XM_021568960.2 | mRNA | downstream | 39819 | 56622540 ~ 56629007 (+) | True | LOC110494163 |
| TU1677057 | other | upstream | 359445 | 56219242 ~ 56220946 (+) | True | G1466224 |
| TU1676992 | other | upstream | 452910 | 56088178 ~ 56127481 (+) | True | LOC110494143 |
| TU1676956 | other | upstream | 563778 | 56015577 ~ 56016613 (+) | False | G1466131 |
| TU1676957 | other | upstream | 563778 | 56015577 ~ 56016613 (+) | True | G1466131 |
| TU1676946 | other | upstream | 582217 | 55996648 ~ 55998174 (+) | False | G1466124 |
| TU1677978 | other | downstream | 534981 | 57117702 ~ 57118886 (+) | True | G1467020 |
| TU1677991 | other | downstream | 563792 | 57146513 ~ 57147741 (+) | False | G1467030 |
| TU1677994 | other | downstream | 566582 | 57149303 ~ 57150343 (+) | True | G1467031 |
| TU1678132 | other | downstream | 896076 | 57478797 ~ 57483589 (+) | True | G1467159 |
| TU1678194 | other | downstream | 915661 | 57498382 ~ 57548178 (+) | False | LOC110494206 |
