Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1678687 |
| length | 1981 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 3 |
| gene id | LOC110494175 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 56827756 ~ 56883416 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
56,820,000
56,830,000
56,840,000
56,850,000
56,860,000
56,870,000
56,880,000
56,890,000
56,900,000
56,910,000
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1678667 | lncRNA | downstream | 29124 | 56770049 ~ 56798632 (-) | True | G1467620 |
| TU1678653 | lncRNA | downstream | 75358 | 56747850 ~ 56752398 (-) | True | LOC110494170 |
| TU1678638 | lncRNA | downstream | 96370 | 56731009 ~ 56731386 (-) | True | G1467597 |
| TU1678623 | lncRNA | downstream | 110229 | 56715985 ~ 56717527 (-) | True | LOC110494169 |
| TU1678630 | lncRNA | downstream | 118230 | 56709289 ~ 56709526 (-) | True | G1467589 |
| TU1678846 | lncRNA | upstream | 155523 | 57028504 ~ 57028975 (-) | True | G1467785 |
| TU1678770 | lncRNA | upstream | 238147 | 57111128 ~ 57111974 (-) | True | G1467714 |
| TU1678885 | lncRNA | upstream | 274330 | 57147311 ~ 57148712 (-) | True | G1467816 |
| TU1678892 | lncRNA | upstream | 288669 | 57161650 ~ 57161886 (-) | True | G1467823 |
| TU1678899 | lncRNA | upstream | 300567 | 57173548 ~ 57173797 (-) | True | G1467830 |
| XM_021568984.2 | mRNA | downstream | 9994 | 56787282 ~ 56817762 (-) | False | LOC110494171 |
| XM_021568983.2 | mRNA | downstream | 10453 | 56787428 ~ 56817303 (-) | True | LOC110494171 |
| XM_021568982.2 | mRNA | downstream | 41685 | 56747847 ~ 56786071 (-) | False | LOC110494170 |
| XM_036950251.1 | mRNA | downstream | 41685 | 56747847 ~ 56786071 (-) | False | LOC110494170 |
| XM_021568981.2 | mRNA | downstream | 47787 | 56747847 ~ 56779969 (-) | False | LOC110494170 |
| XM_021568994.2 | mRNA | upstream | 13885 | 56886866 ~ 56889644 (-) | False | LOC110494176 |
| XM_036950253.1 | mRNA | upstream | 13885 | 56886866 ~ 56889651 (-) | False | LOC110494176 |
| XM_021568992.2 | mRNA | upstream | 13885 | 56886866 ~ 56889712 (-) | True | LOC110494176 |
| XM_036948422.1 | mRNA | upstream | 27292 | 56900273 ~ 56920774 (-) | True | LOC110493224 |
| XM_021568997.2 | mRNA | upstream | 93961 | 56966942 ~ 56972632 (-) | True | olfml3b |
| TU1678489 | other | downstream | 327431 | 56494856 ~ 56500325 (-) | False | elmo2 |
| TU1678487 | other | downstream | 327556 | 56494856 ~ 56500200 (-) | False | elmo2 |
| TU1678490 | other | downstream | 327621 | 56494856 ~ 56500135 (-) | True | elmo2 |
| TU1677371 | other | downstream | 660419 | 56162860 ~ 56167337 (-) | True | dnai1.2 |
| TU1677293 | other | downstream | 857042 | 55954473 ~ 55970714 (-) | True | LOC110494137 |
| TU1678904 | other | upstream | 356526 | 57229507 ~ 57232707 (-) | False | hig1a |
| TU1678906 | other | upstream | 356526 | 57229507 ~ 57232707 (-) | True | hig1a |
| TU1682225 | other | upstream | 2801560 | 59674541 ~ 59676694 (-) | True | G1470802 |
| TU1682385 | other | upstream | 3117994 | 59990975 ~ 59996326 (-) | False | LOC110494253 |
| TU1682386 | other | upstream | 3117994 | 59990975 ~ 59996326 (-) | True | LOC110494253 |
