Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021569012.2 |
| length | 2598 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 8 |
| gene id | stx16 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 57132997 ~ 57145296 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005484 | SNAP receptor activity | molecular_function |
| id | description |
|---|---|
| K08489 | STX16; syntaxin 16 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1678770 | lncRNA | downstream | 21023 | 57111128 ~ 57111974 (-) | True | G1467714 |
| TU1678846 | lncRNA | downstream | 104022 | 57028504 ~ 57028975 (-) | True | G1467785 |
| TU1678687 | lncRNA | downstream | 260016 | 56827756 ~ 56872981 (-) | False | LOC110494175 |
| TU1678686 | lncRNA | downstream | 260016 | 56870865 ~ 56872981 (-) | True | LOC110494175 |
| TU1678685 | lncRNA | downstream | 303607 | 56827756 ~ 56829390 (-) | False | LOC110494175 |
| TU1678885 | lncRNA | upstream | 2015 | 57147311 ~ 57148712 (-) | True | G1467816 |
| TU1678892 | lncRNA | upstream | 16354 | 57161650 ~ 57161886 (-) | True | G1467823 |
| TU1678899 | lncRNA | upstream | 28252 | 57173548 ~ 57173797 (-) | True | G1467830 |
| TU1678900 | lncRNA | upstream | 29212 | 57174508 ~ 57174798 (-) | True | G1467831 |
| TU1678979 | lncRNA | upstream | 160546 | 57305842 ~ 57310683 (-) | True | G1467898 |
| LOC110493226 | mRNA | downstream | 10290 | 57121443 ~ 57122707 (-) | True | LOC110493226 |
| NM_001124495.1 | mRNA | downstream | 16287 | 57113006 ~ 57116710 (-) | True | cathy |
| XM_021568997.2 | mRNA | downstream | 160365 | 56966942 ~ 56972632 (-) | True | olfml3b |
| XM_036948422.1 | mRNA | downstream | 212223 | 56900273 ~ 56920774 (-) | True | LOC110493224 |
| XM_021568992.2 | mRNA | downstream | 243285 | 56886866 ~ 56889712 (-) | True | LOC110494176 |
| XM_021567422.2 | mRNA | upstream | 84144 | 57229440 ~ 57232758 (-) | False | hig1a |
| NM_001160510.1 | mRNA | upstream | 84147 | 57229443 ~ 57232708 (-) | False | hig1a |
| XM_021567423.2 | mRNA | upstream | 84318 | 57229614 ~ 57232755 (-) | False | hig1a |
| XM_036947896.1 | mRNA | upstream | 84318 | 57229614 ~ 57233433 (-) | False | hig1a |
| XR_005037022.1 | mRNA | upstream | 148940 | 57294236 ~ 57308483 (-) | True | LOC118940479 |
| TU1678489 | other | downstream | 632672 | 56494856 ~ 56500325 (-) | False | elmo2 |
| TU1678487 | other | downstream | 632797 | 56494856 ~ 56500200 (-) | False | elmo2 |
| TU1678490 | other | downstream | 632862 | 56494856 ~ 56500135 (-) | True | elmo2 |
| TU1677371 | other | downstream | 965660 | 56162860 ~ 56167337 (-) | True | dnai1.2 |
| TU1677293 | other | downstream | 1162283 | 55954473 ~ 55970714 (-) | True | LOC110494137 |
| TU1678904 | other | upstream | 84211 | 57229507 ~ 57232707 (-) | False | hig1a |
| TU1678906 | other | upstream | 84211 | 57229507 ~ 57232707 (-) | True | hig1a |
| TU1682225 | other | upstream | 2529245 | 59674541 ~ 59676694 (-) | True | G1470802 |
| TU1682385 | other | upstream | 2845679 | 59990975 ~ 59996326 (-) | False | LOC110494253 |
| TU1682386 | other | upstream | 2845679 | 59990975 ~ 59996326 (-) | True | LOC110494253 |
